Rhodococcus sp. p52: IM25_03825
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Entry
IM25_03825 CDS
T05434
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03030
DNA replication
rhq03430
Mismatch repair
rhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM25_03825
03430 Mismatch repair
IM25_03825
03440 Homologous recombination
IM25_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhq03032
]
IM25_03825
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_03825
Enzymes [BR:
rhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM25_03825
DNA replication proteins [BR:
rhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM25_03825
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM25_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOD20870
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All DBs
Position
866717..867496
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AA seq
259 aa
AA seq
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MTHWPDRPICAFDLETTDRDPRNARIVTACVATFDGDRIGTRSWLLDPGIAIPEETTAIH
GITTAHARAEGLDYLEGYKQIRQAVSGAWARGHIVVAFNASYDLTVLDAEGRRLGLTGLD
IGTVVDPYVIDREMDRSRPGRRTLQAVCEAYGVSLPNPHEAEADALAAGHLTRALVARFP
ELAELDIMADQAAWHAERQRSFAEYLRGLGREVVDVDDSWPVRLPTPVGTDVLERPATET
KFRRALSAIREFFRRLRRR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgcactggccggacagaccgatctgcgcgttcgatctcgagaccaccgaccgggat
ccccgcaacgcccgcatcgtcacggcatgcgtcgcgaccttcgacggcgatcgcatcggc
acacgctcgtggctgctcgacccggggatcgcgatacccgaggagaccaccgcgatccac
ggcatcaccaccgcccacgcccgcgccgaaggactcgactatctcgagggatacaagcag
atccggcaggccgtgagcggcgcgtgggcgcgcggccacatcgtcgtcgcattcaacgcc
agctacgacctgacggtcctcgacgccgaaggacgccggctcggcctgacggggctcgac
atcggcacggtcgtcgacccgtacgtcatcgaccgggagatggaccgcagccggcccggc
aggcgcacactgcaggcggtgtgcgaggcgtacggggtgtcgctgccgaatccgcacgag
gccgaggccgacgcgctcgccgccggccacctgacccgcgcgctcgtggcgagattcccc
gagctcgccgaactcgacatcatggccgatcaggccgcctggcacgccgaacggcaacgc
agctttgccgagtacctgcgcgggctgggtcgcgaggtcgtcgacgtcgacgacagctgg
cccgtccggctccccacgccggtgggtaccgatgtcctcgagcgtcccgcgaccgagacg
aagttccggcgcgcgctgagcgcgatccgcgagttcttccggcgactgcgccgccgctga
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