Rhodococcus sp. p52: IM25_06405
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Entry
IM25_06405 CDS
T05434
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhq
Rhodococcus sp. p52
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhq03032
]
IM25_06405
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_06405
Enzymes [BR:
rhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IM25_06405
DNA replication proteins [BR:
rhq03032
]
Prokaryotic type
DNA Topoisomerases
IM25_06405
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IM25_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AOD21300
LinkDB
All DBs
Position
1395649..1397685
Genome browser
AA seq
678 aa
AA seq
DB search
MAAQKSNNNKSEYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMA
GYASKVEVTLLADGGVQVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDAYAVSGG
LHGVGISVVNALSTTLEVEIDNDGYHWEQTYTASKPGELVRGEATKQTGTTVRFWPDPEI
FETTTFNFETVARRLQEMAFLNKGLTITLTDERVAPEEVTDEDVPETAEAPKTAEDQAVE
ATEPEVHKVKVRTYHYPGGLEDYVRHINRTKSPIHNSVVGFTAKGTGHELEVAMQWNSGY
SESVHTFANTINTHEGGTHEEGFRAALTTVVNRYAKDKKLLKDKDPNLTGDDIREGLAAI
ISVKVAEPQFEGQTKTKLGNTEVKSFVQKACNEHISHWFEANPADAKTIVTKAVSSAHAR
VAARKARELVRRKSATDIGGLPGKLADCRSKDPSKCEIYIVEGDSAGGSAKSGRDSMYQA
ILPLRGKIINVEKARIDKVLKNAEVQSIITAFGTGIHEEFDISKLRYHKIVLMADADVDG
QHIATLLLTLLFRFMRPLVEEGHVFLAQPPLYKLKWQRSEPEFAYSDRERDALLEAGLKA
GKRINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVA
ARRSFITRNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcgaacaacaacaagagtgagtacggtgcgtcgtccatcaccgtc
ctcgagggtctcgaggcggtgcgcaagcgccccggtatgtacatcggttccaccggagag
cgtggcctgcaccacctgatctgggaggtcgtcgacaactccgtcgacgaggccatggcc
ggttacgcgtcgaaggtggaggtcaccctcctcgccgacggcggtgtccaggtcgtcgac
gacggtcgcggtatccccgtcggtatgcacgcctccggtgtgcccaccgtcgaggtcgtc
ctcacccagctccacgcgggtggcaagttcgactccgatgcctacgccgtctccggcggt
ctgcacggtgtcggtatctccgtggtgaacgccctgtccacaaccctcgaggtcgagatc
gacaacgacggctaccactgggagcagacgtacaccgcctcgaagccgggcgagctcgtc
cgcggtgaggccaccaagcagaccggtaccaccgtccgcttctggccggacccggagatc
ttcgagaccacgacgttcaacttcgagaccgtcgcgcgtcgcctgcaggagatggcgttc
ctcaacaagggactgaccatcactctcaccgacgagcgggtcgctcccgaagaggtcacc
gacgaggacgtcccggagaccgccgaggcgccgaagaccgccgaggaccaggccgtcgag
gcaaccgagcccgaggtgcacaaggtcaaggtccgcacctaccactacccgggtggtctc
gaggactacgtgcgccacatcaaccgcacgaagtcgccgatccataactccgtcgtcggg
ttcaccgccaagggcaccggccacgaactcgaggtcgcgatgcagtggaactcgggttac
tccgagtccgtccacaccttcgccaacaccatcaacacccacgagggcggtacgcacgag
gaaggcttccgtgcggcgctgaccacggtcgtcaaccgctacgcgaaggacaagaaactc
ctcaaggacaaggacccgaacctcacgggtgacgacatccgtgagggtctcgcggcgatc
atctccgtcaaggtcgctgagccgcagttcgagggccagacgaagaccaagctcggcaac
accgaggtgaagtccttcgtgcagaaggcgtgcaacgagcacatctcgcactggttcgag
gccaacccggccgacgcgaagacgatcgtcaccaaggccgtgtcgtcggcgcacgcgcgt
gtcgccgctcgtaaggcgcgcgagctcgtccgccgcaagagcgcgaccgacatcggtggt
ctgcccggcaagctcgccgactgccggtcgaaggacccgagcaagtgtgagatctacatc
gtggagggcgactccgcgggtggctccgccaagtcgggtcgcgactcgatgtaccaggcg
atccttccgctgcgcggcaagatcatcaacgtcgagaaggcccggatcgacaaggtcctc
aagaacgccgaggtccagtcgatcatcacggcgttcggtaccggcatccacgaggaattc
gacatctcgaagctgcggtaccacaagatcgtcctgatggccgacgccgacgtcgacggt
cagcacatcgcgacgctgctgctcacgctgctcttccgcttcatgcggccgctggtcgag
gaaggccacgtcttcctggcacagccgccgctgtacaagctcaagtggcagcgcagcgag
ccggagttcgcgtactccgaccgcgagcgcgacgccctgctcgaggcgggtctgaaggcc
ggcaagaggatcaacaaggacgacggcatccagcgctacaagggcctcggtgaaatgaac
gccaaagagctgtgggagaccaccatggatccgagcgtccgcgtcctgcgtcaggtgacc
cttgacgacgccgctgccgccgacgagctgttcagcgttctgatgggtgaggacgtcgcg
gcacgacggagcttcatcacccgtaacgcgaaggatgtccgcttcctcgacgtctga
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