Rhodococcus sp. p52: IM25_07405
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Entry
IM25_07405 CDS
T05434
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00074
Mycolic acid biosynthesis
rhq01100
Metabolic pathways
rhq01110
Biosynthesis of secondary metabolites
Module
rhq_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
IM25_07405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhq01004
]
IM25_07405
Lipid biosynthesis proteins [BR:
rhq01004
]
Polyketide synthase
Modular PKS
IM25_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Abhydrolase_6
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
AOD21473
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All DBs
Position
1601141..1606096
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AA seq
1651 aa
AA seq
DB search
MSDTEMTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVT
LNATIAYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVD
TPEQMWELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAM
SPREVEMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAA
HPYALTGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGG
VNMLLAPAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDIL
AVIAGSAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIE
ADALGRVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAP
NPYIPFDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAE
VEVLPEEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVAR
TLARRNHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQH
RKMAKQLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGL
AALLRHHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIR
LMALVEYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVLQ
TKGASHTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHEGIHDVEYWTKGM
RHSVYFTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESL
GVLTALAQLYVHGQSVDLRTLLPEGDYADLPRTAFLRKPYWVDASIGTSGNGRAPGARVA
LPDGRYVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGG
ASLQVHANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGS
QSLDDRLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVK
DASLRDVAKYLRYAVENREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQI
LAEAEAEAEAEAEAEAEAQTAPETAEPEQESSGVDVPPRDAAERLTFASWAVVTGKSAKG
IFNRLPKLDRDVAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLV
RTLRPRAEGSDTVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIETRAQAYLP
LIKEIQGDGPYVLCGWSLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIR
KRWQRYSAFAKKTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTS
WLDNRAIQTAELLPYDGKVVLYMADKYHDDAIDLEPAFGTRLPDGGWGEVVADLEVVHVG
GDHLQIVDEPYISKVGEDLTRKLADIEASRS
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactgaaatgacggttgcgcagctgcgcgaatggctgcgcaactggatcgcc
gacgcgaccgggcagccggtctcccagatctcggacgatcgtccgatggaggagttcggg
ctgtcctcccgggacgccgtcgccatggcgggtgagatcgaggaactcctcggtgtcacc
ctcaacgcgacgatcgcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatc
gaaggtgagcccgaggcacccgctgaggacgactccgccctgtacacggtcggtgccgcg
gcgggttcgaaggacgtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgac
acccccgaacagatgtgggagctgctcgcgtccggacgcgacggcatctccgatctgccc
gagggccgctggtcggagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgcc
aacaccaggggcggctacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatg
tcgccgcgcgaggtcgagatggtcgacccgcaacagcgcctcgcgctggagctgacctgg
gaagcactcgagcacgcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtg
ttcatcggcagctcggcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcg
catccctacgcgctcaccggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttc
tacgacttccacggcccgtcggtcacgctcgacacggcgtgctcgtcgtcgctggtcgcc
gtgcaccaggccgtacgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggc
gtcaacatgctgctcgccccggccggcaccctcggcttcgacgaactcggcgtcatggca
cccgacggccgcatcaaggcgttctccgccgacgccgacggcatgatccgcgccgagggc
gggggtctcgtcgtgctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctc
gcggtgatcgccggttcggccgtcaaccaggacggccgctccaacggcctggccgctccc
aaccccgaagcgcaggtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccg
tccggtgtcgactacatcgaggcgcacggcaccggcacggtgctcggcgacccgatcgag
gccgacgcgctcggccgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctc
ggttcggccaagaccaacttcggtcacctcgagtccgccgcgggtgcggccggtctcatc
aaggtcgttctcgcgatgcagaacgatcagctgcccccgacgctcaactacacggcgccc
aacccgtacatcccgttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtgg
ccgcgctacaccggtcgcgccgtcgccggtgtgtccggcttcggtttcggtggcacgaac
gcgcacgtcgtcgtgcgcgagtacaccggccccgaggggctcgaagcgtccgaggccgag
gtcgaggtcctgccggaggagatccccgccgcggagaccaccgagcaggcccgcgagctg
cccgtcctgctcgccgtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgat
ctcgccgactggctcgagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgc
acgctcgctcgtcgcaatcacggccggtcccgcgcgatcgtcgtggcgagcaaccacggt
gaggcgatcgccggtctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcacc
gccgacgctcccgcctccaagggcgcggtgtgggtgctctccggcttcggtgcccagcac
cgcaaaatggccaagcagctgtacctggagaacccggtcttcgcggcggccgtcgacgag
gtcgacgagctgatctacgacgagtcgggctattccatgaaggagaagttcctcgacgac
gcgcaggactacgacgtcgagacggcgcaggtcggcatcttcacgatccagatcggtctc
gccgcgctgctgcgccaccacggtgccgagcccgccgcggtcgtcggccactcgatgggt
gaggccgccggcgcctacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatc
tgctcgcgttcgcgtctgatgggtgaggccgaatccggcctgaccggcgacgacatccgc
ctcatggcgctcgtcgagtacagcgccgccgagatcaccgacgtgctgcccgacttcccg
cagctcgaggtctgcgtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggag
caggtcaacgcgatcgtcgcgcgtgccgaggccgaggagaagttcgcccgggtcctgcag
accaagggcgcgagccacacctcgcaggtcgatccgatcctcggcgagctcgcggccgag
ctcgccggcatcgaaccgcaccgtctgaaggtcgacctgtactcgtcggtcgaccaggag
accctctaccgtgcaggtcacgagggcatccacgacgtggagtactggaccaagggcatg
cgccacagcgtgtacttcacgcaggcgatccggcaggcgctgtccgacgggcacaccacc
ttcgtcgagctcaacgccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgac
gccggtgtgcaggacggccagttcatccagacgctcaagcgcaaggaggacgagtccctc
ggtgtgctgaccgcgctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacg
ctgctgccggaaggcgactacgccgacctgccgcgcaccgccttcctgcgcaagccgtac
tgggtcgacgccagcatcggcacctccggcaacggccgcgcgcccggcgcccgggtcgca
ctgcccgacggccgctacgtgtgggaggtgcaggcatccgccgtcaccgatgcggccgag
ctggtcgtcgcggcggcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccg
cacaccgacgttcccgcgaccggcaccctcaccacgacgctcacccggcacccgggtggc
gcgtcactgcaggtgcacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtc
gtcacatccggtgagccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcag
gccgaggagcttcccgaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcg
cagagcctcgatgaccgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgag
gatctgcccgccgagatcccgctcatcgagctgggcctcgactcgctcatggcggtccgc
atcaagaaccgcgtcgagtacgagttcgacatcccgcagctgcagctgtcggcggtcaag
gacgcgagcctgcgcgacgtcgcgaagtacctgcgatacgccgtcgagaaccgcgaggag
gtcgcgcagctcgccgagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcg
gagcaggacgatcttcccgaggtcgaggacaccaccgcggtgggcgaggccgagcagatt
ctcgccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcacagacc
gcgcccgagacggccgagcccgagcaggagtcgagcggtgtcgacgtgccgccgcgcgac
gccgcggaacggttgaccttcgcctcgtgggccgtggtcacgggcaagtcggccaagggc
atcttcaaccggttgccgaagctcgaccgcgatgtcgccgagaagctcgcggcacggctg
accgagcgggccgagggtgagatcaccgtcgacgacgtgctctccgccccgaccgtcgag
cagctcgccgagaccgtccgtcagcatctcgaatccgccgatcgcatcgacggactcgtg
cgcaccctgcggccccgcgccgagggatcggacaccgtgccggtcttcgtcttccacccc
gcgggtggttcgacggtcgcgtacgagccgctgctgcgccgcctgcccgcgcacaccccg
gtgttcggtttcgagcgcaccgagggcccgatcgaaacccgcgcacaggcgtacctgccg
ctcatcaaggagatccagggcgacggcccgtacgtgctgtgcggctggtcgctcggcggt
gtcctggcctacgcggtggcccgtctgctccgcgaggagggcaaggacgtgcgtctcgtc
ggtctcatcgacaccgtcatggccggtgagaaggtcgaggacacgcccgacgagatccgc
aagcgctggcagcgttactcggcgttcgcgaagaagacctacggggtcgacgcgccgctg
ccctacgacctgctggccgaggccggcagcgacgaggagcagatcggcatcctgatgggt
ctgctcgagctgagcggggcgcagatccccggcggcatcatcgagcaccagcgcacgtcg
tggctcgacaaccgcgccatccagaccgcggagctgctgccctacgacggcaaggtcgtg
ctgtacatggccgacaagtatcacgacgacgcgatcgatctcgagccggccttcgggacc
cggctgcccgacggtgggtggggtgaggtcgtcgcggatctcgaggtcgtgcacgtcggc
ggcgatcacctgcagatcgtcgacgagccgtacatctcgaaggtgggggaagacctgacc
cgcaagctggccgacatcgaggcctcgaggagctga
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