Rhodococcus sp. p52: IM25_07420
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Entry
IM25_07420 CDS
T05434
Name
(GenBank) arabinosyltransferase
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
IM25_07420
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhq01003
]
IM25_07420
Glycosyltransferases [BR:
rhq01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IM25_07420
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Ortholog
Paralog
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
AOD21476
LinkDB
All DBs
Position
complement(1608214..1611522)
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AA seq
1102 aa
AA seq
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MPDDVTTSPAPAPTAPRSMGEDLRTRYRTARLVAVVAGLLGMILALATPFLPVRVTEATM
SWPKDAAATDVELPLMSQVPLQLRATVPCSAVAEMPGDGGMLLATAPTNGQDAALNAMFV
RVGAENVDVLDRNVVVATAPRADVESGACSELQIFSDSERTTAEFVGLSDENGNPRSGEL
TGDLRPLVVGVFSDLPTAAPGLDVTVDVDSRFTSSPTLVKSLAMVLAVLSTALALGALAK
LDGTDGRGHRRFLPSRWWKFTGVDVVVVLTLVGWHFFGANTSDDGYLLTMARAAENSGYM
ANYFRWFGVPEAPFGWYYDVLAAFAKISTASPWMRIPALIAGILCWMVISREVVPRLGRA
VRHNRIALWTGGLVFLAFWLPYNNGLRPEPIVALGALLTWCSIERAIATGRLLPAATAVF
IGAFTLAAAPTGLMCIAALIAGIRPMTRIIVRRHREVGPLPLLAPIGAAGMLVLVVVFSD
QTLAAVLEATRVRTIIGPNEEWWNDFLRYYYLMVQTVDGSLPRRFAFLTMLLCLFTTLFV
LLRRRRIPGVAVSPTWRLLGIVFGTIFFMMFNPTKWTHHFGAYAGIAGSLATVTAVVVSA
SALRSRRNRTIFLAGVLFVLAVSFAGINGWWYVSSYGVPWFDKTVSLSGYQSSSLFLVLF
GLALVLVAWQYLREGYAPPPESAETKKGRRIRALAAAPLTVVAAVMVLFEVLSLLKGAVS
QYPAYSLARSNIGAVAGQTCGLANDVLVEADPNEGRLEPIIDPADPPANDDPLAGAAPRG
FTPDGVPSDLTADYVEVKPGQGNTDNQSVGPTFETGAGGGTTGGSGEQTVNGSTVRLPFG
LDPSVTPVLGSYQEGVQEPAALTSSWYALPGITDETPLVIISAAGRIWSYDDTGALTYGQ
SLLVEYGTRQADGSVEAKGTYLPRDIGPAPSWRNLRVPLADLPDDVDAVRIVANDPNLTG
DQWLAFTPPRVPILERLDAQLGSEQPLLLDWAVGLQFPCQRPFDHWAGVAEMPNYRVLPD
RPLAVSSTDTWQSADNGGPLGFAEVLARPEQVPTYLENDWGRDWGSVERYVRFYPNAQPA
ELTTTEVTRSGLWKPAPMRVYE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgacgtgacgacctcacccgcgcccgctccgaccgccccccggtcgatgggc
gaggaccttcgcactcggtaccggactgcgcgactcgtcgccgtcgtcgccgggttgctc
ggcatgatcttggcgctggccacaccgtttctcccggtccgcgtgaccgaggcgacgatg
tcgtggccgaaggacgcggcggcgaccgacgtcgaactgccgctgatgtcgcaggtcccc
ctccagctccgcgccaccgtgccgtgcagcgccgtcgcggagatgcccggcgacggcggg
atgctgctcgcgaccgcccccaccaacgggcaggacgccgccctcaacgcgatgttcgtg
cgggtcggcgccgagaacgtcgacgtgctcgaccgcaacgtggtggtcgcgaccgcgccg
cgcgccgacgtcgagtcgggtgcgtgcagcgaactgcagatcttctccgactccgaacgc
accaccgccgagttcgtcggcctctcggacgagaacggcaacccgcggtcgggtgagctc
accggcgacctgcggccgctcgtcgtgggcgtgttcagcgacctgccgaccgcggctccc
ggcctcgacgtcaccgtcgatgtcgattcccggttcacgtcgtcgccgacgctggtcaag
tccctcgcgatggtcctcgcggtgctgtcgacggcactcgcgctcggcgcgctggccaag
ctcgacggcacggacggtcgcggtcaccgccgcttcctgccgtcccgctggtggaagttc
accggcgtcgacgtcgtcgtggtcctcacgctcgtcggctggcacttcttcggcgcgaac
acctcggacgacggctacctgctgaccatggcccgggcggcggagaactccggctacatg
gccaactacttccgctggttcggtgtccccgaagctcccttcggctggtactacgacgtg
ctggcggcgttcgcgaagatctccacggccagcccatggatgcgcatcccggcactgatc
gccggaatcctgtgctggatggtcatcagccgtgaggtggtgccgcgtctcggccgggcc
gtgcggcacaaccgcatcgcactgtggaccggcggactggtcttcctcgccttctggctg
ccctacaacaacggtctgcggcccgagccgatcgtcgcgctcggtgcgctgctgacctgg
tgctcgatcgaacgcgccatcgcgaccggtcgtctgctgcccgccgcgacggcggtgttc
atcggcgccttcaccctcgccgctgcaccgacgggcctgatgtgtatcgccgcgctcatc
gccggcatccggccgatgacgcggatcatcgtgcgccgccaccgcgaggtcggccccctg
ccactgctcgccccgatcggcgccgccgggatgctcgtgctcgtcgtggtgttctccgac
cagaccctcgccgcggtcctcgaggcgacccgcgtgcgcaccatcatcggccccaacgag
gagtggtggaacgacttcctccgctactactacctgatggtgcagaccgtcgacggttca
ctgccgcgccgcttcgcgttcctcacgatgctgctgtgcctgttcacgacgctgttcgtg
ctgctgcgccgccgccggatccccggcgtcgccgtgagcccgacctggcgtctgctcggc
atcgtcttcggcacgatcttcttcatgatgttcaaccccacgaagtggacccaccacttc
ggggcgtacgcaggcatcgccggatcgctcgcgacggtcaccgccgtcgtggtctccgcg
agcgcattgcggtcgcggcgcaaccgcacgattttcctcgccggagtgctgttcgtcctg
gcggtgtcgttcgccggcatcaacggctggtggtacgtctcgagctacggcgtgccgtgg
ttcgacaagaccgtctcgctgagcggctaccagtcgagctcgctgttcctggtcctgttc
ggtctcgccctggtgctcgtcgcgtggcagtacctccgcgagggctacgcaccgccgccg
gagtcggccgagacgaagaagggccggcggatccgcgccctcgcggctgcgccgctcacg
gtcgtcgccgcggtgatggtgctgttcgaggtgctgtcgctgctcaagggcgcggtgtcg
caatacccggcgtactcgctcgctcgctccaacatcggggcggtcgccgggcagacctgc
ggtctcgcgaacgacgtgctcgtcgaggccgaccccaacgagggacgcctcgaaccgatc
atcgaccccgccgatccgccggcaaacgacgacccgctcgccggtgcggcgccgcgcggt
ttcactcccgacggcgtgccgtccgacctgaccgccgactacgtcgaggtcaagccgggt
cagggcaacaccgacaaccagagcgtcggcccgaccttcgagacgggcgcgggcggcggc
accacgggtggttccggtgagcagaccgtcaacggcagcaccgtgcgtctgcccttcggg
ctcgacccgtccgtcaccccggtgctcggcagctaccaggagggtgtgcaggaacccgcc
gcgctcacctccagctggtacgcccttcccgggatcaccgacgagacgccgctggtgatc
atctccgcggccggtcgcatctggtcgtacgacgacaccggtgcactgacctacggccag
tcgctgctcgtcgagtacggcacccgccaggccgacggcagcgtcgaggcgaagggcacc
tacctgccgcgcgacatcggccccgcaccgtcgtggcggaacctgcgtgtgccgctcgcc
gacctgcccgacgacgtcgacgccgtccgcatcgtcgccaacgaccccaacctcaccggc
gaccagtggctggcgttcacgccgccgcgcgtccccatcctcgagcggctcgacgcccag
ctcggttccgagcagccgctcctgctggactgggccgtgggtctgcagttcccgtgccag
cggccgttcgaccactgggccggtgtggccgagatgccgaactaccgggtcctccccgac
cgtccgctcgcggtgtcgtcgaccgacacctggcagtcggccgacaacggtggcccgctc
ggcttcgcggaggtcctggcgcgacccgagcaggtgcccacctacctcgagaacgactgg
gggcgcgactggggttcggtggagcggtacgtgcgcttctacccgaatgcgcagccggcc
gaactgaccaccaccgaggtgacgaggtccgggttgtggaaacccgcgccgatgcgcgtc
tacgagtga
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