Rhodococcus sp. p52: IM25_11730
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Entry
IM25_11730 CDS
T05434
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rhq
Rhodococcus sp. p52
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_11730
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM25_11730
Archaeal homologous recombinant proteins
IM25_11730
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
AOD22197
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All DBs
Position
2521908..2523086
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AA seq
392 aa
AA seq
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MRILHTSDWHIGRTFHGVDLLADQARALRAIADLVAERRIDVVVVPGDVYDRSIPSSDAV
AVCNAGLEAIREAGAIIVATSGNHDSPVRLGAGAAFAAHGGLHLITRVSQIDSPVVLHDE
HGPVRFYGIPYLEPEITRAELGVPEARSHQQILDAAMERVRADVADRHGRTVVLAHAFVV
GGEPSDSERSISVGGVETVAASSFDGVDYVALGHLHSPQTVSETVRYSGSPLPYSFGERS
HRKAVFVVDLDASGAASVERVDLPVIRELTRLEGELDDLLADPAHAAVEEHYVSAVLTDA
IRPLDAMRRLQERFPYAVHVEWQRPAGSTEGSYRDKVRGRSDRDIAASFLTDVRSEPSER
ERSWIDEALREVDRRRGIGDETDTQWRTDVPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctgcacacctccgactggcacatcggccgcaccttccacggtgtcgacctg
ctcgccgaccaggcgcgtgcgctgcgggccatcgccgatctggtggccgaacgccggatc
gacgtggtggtcgtgccgggcgacgtgtacgaccggtcgatcccgagttccgacgcggtt
gccgtgtgcaacgccggcctcgaggccatccgtgaggcaggggcgatcatcgtcgccacc
tccggcaaccacgactcgccggtccggctcggtgccggcgctgccttcgccgcgcacggg
ggtctgcacctgatcacccgcgtatctcagatcgacagccctgtcgtcctgcacgacgag
cacggcccggtccgcttctacggcatcccgtatctcgaacccgagatcacccgcgccgag
ctcggcgtgcccgaggcccgttcgcaccagcagatcctcgacgcggcgatggaacgcgtg
cgcgccgatgtcgcggatcggcacggccgcacggtcgtcctggcgcacgccttcgtcgtc
ggtggcgagcccagcgactccgagcggtccatctccgtcggcggggtcgagacggtcgcc
gcgtcgtcgttcgacggtgtcgactacgtcgcgctcggtcacctgcattccccgcagacg
gtgagcgagacggtccggtactcgggatcgccgttgccgtactccttcggcgagcgctcg
caccgcaaggcggtcttcgtcgtcgacctcgacgcctcgggtgcggcgtccgtcgagcgg
gtcgatctcccggtgatccgcgaattgactcgtctcgaaggcgaactggacgatctgctc
gccgatccggcgcatgccgccgtcgaggagcactacgtctccgcggtgctgaccgacgcg
atccgcccgctcgacgccatgcgtcgcctgcaggagcggttcccgtacgccgtgcacgtc
gaatggcagcgaccggccgggtccacggagggcagctaccgcgacaaggtgcgcgggcgc
agtgatcgcgacatcgccgcgtcgttcctcaccgatgtgcgttccgagccgtccgaacgc
gagcgcagctggatcgacgaagcgttgagggaggtcgaccgtcgtcgtggcatcggcgac
gagaccgacacgcagtggcggacggacgtgccggcatga
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