Rhodococcus sp. p52: IM25_11885
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Entry
IM25_11885 CDS
T05434
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM25_11885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_11885
Enzymes [BR:
rhq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM25_11885
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM25_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOD22222
LinkDB
All DBs
Position
2554286..2557579
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AA seq
1097 aa
AA seq
DB search
MLILHRAERTGILADALAEVLAEPLDDPFAREVVAVPARGVERWLTQRLSGMLGSSAGDG
VAANIDFPSPSRLVDEALAAASGITADDDPWHPSRMLWSLLGVIDECVGEPWCATLARHL
GHGAGDHRAGRRYATAAHLTGLLRSYGLQRPGMISQWAAGNDTDGTGAPLDDHLRWQAEL
WRRLRARIGVDSPSQRLDELCGRLRDDPDVVDLPERLSMFGPPRLDTVLVEVLTALGHHR
DVHIWLPHPSPVMWDGLTRRPESMRRADDHSALGVQHPLLAALGRDVRELQSRLSGLECT
DLPHPSPRPPATLLGRLQADLRDDRAPAHGSAAPDGTVMIHACHGPTRQVEVLRECLLHL
FRDDPTLEPRDVVVMCPDVETYAPLVHAAFGAGVGEHPGHTLRVRLADRGLRRTDPVLAV
VSELLALADGRVTASEVLDLAASAPVRRKFGFDDDELERLQEWTTETGARWGLGPWQRKS
FGLGDFMQNTFGAALDRILLGVAADGADGEWLSLSLPLDDVDSNDIDLAGRFAEFIDRLT
VVLLRLRGPHPAGRWSDELGYGIDLLADVPAADAWQLTRARREIGEAVEHAGDTQLSLSD
VRSMLSSRLAGRPSRSNFRTGELTVCTMVPMRSVPHRVVVLLGLDDDVFPRTAHIDGDDV
LTQNPCVGERDPRSEDRQLLLDALMAAEERVLLFHTGADAVTGALRPPAIPLTEVRDVVS
TMTGVDVDDERIVRRHPLQPFDPRNFRADDPFGFGVTALAGARAGQGVSVERDRSGALLV
DDLPAPARTDVDLDELVSFLTHPTQGFLRQRLGLRIPDTDEGIADALDVELDGLAQWQLG
DRMLEARLAGMSAGAFQDAEWRRGTLPPFALGRRTLDAVSDNVDRLVHACAGVHTGQART
VDIRVDLGDGRRLTGTVGGVHGEVLARSTYSKLSPKHRLEAWIRLLAVVASGHPGQWRAV
TTGRSRSRSYPAWRSPLLAPADPVALLAALVDLRDRGLCRPLPLVTGASAEYADRRHRGD
SVEMALSAAGKAFGGAFGDGKDRHVQYLYGPDVTFGQLTADAPEGVEAGWFDDPTRFGVL
ARRLWEPLLASENQGRP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatactgcaccgtgccgagcgcaccggcatcctggcggatgcgctggccgaggtg
ctcgccgagcccctcgacgatccgttcgcgcgggaggtcgtcgcggtgcccgcgcgcggt
gtcgaaagatggctcacccagcggttgtcgggaatgctcggttcctccgccggcgacggg
gtggccgccaacatcgacttcccgtccccgtcccgcctcgtcgacgaagcgctcgccgcg
gcctccggcatcaccgccgacgacgatccgtggcatccctcccgcatgttgtggtcgctg
ctcggggtgatcgacgagtgcgtcggcgaaccgtggtgcgccaccctcgcgcggcatctc
ggtcacggcgccggcgaccaccgggccggacgccggtacgccaccgcagcgcatctcacc
ggccttctccgcagttacggactccagcgccccgggatgatctcccagtgggcggcgggg
aacgacaccgacggcacgggtgcgcctctcgacgaccatctgcgttggcaagccgagctg
tggcgacggctgcgcgcccgcatcggcgtcgacagcccgtcgcagcgactcgacgaactg
tgcggccggctgcgagacgaccccgacgtcgtcgacctgcccgaacgactctcgatgttc
ggtcccccccgcctcgacaccgtcctcgtcgaggtgctgaccgcgctcgggcaccaccgc
gacgtgcacatctggcttccgcatccgagcccggtgatgtgggacggactgacccggcgt
ccggagtcgatgcgtcgcgccgacgaccacagcgctctcggggtgcagcacccgctgctg
gccgcgctcggccgcgacgtgcgcgaacttcagagccggctctccggcctcgagtgcacc
gaccttccgcatccctcaccccggccgccggcgacgctcctcggccggttgcaggccgat
ctccgcgacgaccgcgcccccgcacacggatcggccgcgcccgacgggaccgtgatgatc
catgcctgccacggccccacccggcaggtcgaggtgctccgcgagtgcctgctgcacctg
ttccgcgacgaccccacgctcgaaccgcgcgacgtcgtcgtcatgtgccccgacgtcgag
acgtacgcgccgctcgtccacgccgccttcggtgccggagtcggtgagcatcccggccac
acgctgcgggtccgtctcgccgatcgtggcctgcgccgcaccgatccggtgcttgcggtg
gtgtccgaactgctcgcgctcgccgacggccgggtcaccgccagcgaggtcctcgatctc
gccgcctccgccccggtgcgccgcaagttcggattcgacgacgacgaactcgaacgcctg
caggagtggaccaccgagaccggtgcccgttggggtctcggcccgtggcagcgcaagagt
ttcggtctcggcgacttcatgcagaacaccttcggggcggcactcgaccgcatcctgctc
ggtgtcgccgccgacggagcggacggggagtggctgtcgctgtcactgcccctcgacgac
gtcgacagcaacgacatcgacctcgccggtcggttcgccgagttcatcgaccggctgacg
gtggtgctgctccggctgcgcggcccgcacccggcggggcggtggtcggacgaactcggt
tacggcatcgacctgctcgccgacgttcccgccgccgacgcatggcagctcacccgcgcg
cgtcgcgagatcggcgaggccgtcgagcatgccggcgacacgcagttgtccctgagcgac
gtccggtccatgctctcctcccggctcgccgggcgtccgtcgcgctcgaacttccgtacc
ggcgaactgaccgtgtgcacgatggtgccgatgcgctcggtgccccatcgcgtggtggtt
ctcctcggtcttgacgacgacgtcttccctcgcacggcccacatcgacggcgacgatgtc
ctgacccagaatccctgtgtgggagagcgtgatccgcgcagcgaggaccggcagctgctg
ctcgacgcgctgatggccgcggaggagcgtgtgctgttgttccacaccggcgccgacgcc
gtcaccggagcactgcgcccaccggcgattccgctcaccgaggtgcgcgacgtggtgtcg
acgatgacgggagtcgacgtcgacgacgagcgcatcgtgcggcgacatcccctgcagccc
ttcgatccgcgcaatttccgggccgacgacccgttcgggttcggtgtcaccgcactcgcg
ggagcccgtgccggacaaggagtttcggtggagcgcgaccggtcgggtgcgctcctcgtc
gacgaccttccggccccggcacgcaccgatgtcgatctcgacgaactcgtttccttcctg
acacatccgacgcagggattcctccggcagcgactcggtctgcggatccccgacaccgac
gagggcatcgccgacgcactcgacgtcgaactcgacggtctcgcccagtggcaactgggc
gaccgcatgctcgaagcgcgattggcgggcatgtccgcgggggccttccaggacgcggaa
tggcgtcgcggcacgctcccgccgttcgcgctcggccgcaggaccctcgacgcggtgagc
gacaacgtcgaccgcctcgtgcacgcctgcgccggtgtgcacaccgggcaggcccgcacc
gtcgacatccgcgtcgatctcggcgacggtcgtcggctcaccggcaccgtcggaggtgta
cacggcgaggtactggcccgcagcacctattccaagctgtccccgaaacaccggctggaa
gcatggatccggttgctcgccgtcgtcgcctcgggtcatcccggacagtggcgtgcggtg
accaccgggcgcagccgttcgcgctcgtatccggcctggcgctcgccccttctggccccc
gccgatcccgtcgcgctgctcgccgcactcgtcgatctgcgcgatcgtggactgtgccgg
ccgctgccgctcgtgacgggcgcgtcggccgagtacgccgatcgccgccaccgcggtgat
tccgtggagatggcactgtcggccgccgggaaggcgttcggtggcgcgttcggcgacggc
aaggaccgtcacgtgcagtatctgtacgggcccgacgtcacgttcgggcagctcaccgcc
gacgcaccggagggtgtcgaggccggctggttcgacgaccccacccgtttcggtgtgctc
gcccgacggttgtgggaacccctgctcgcctccgagaaccagggacgcccgtga
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