Rhodococcus sp. p52: IM25_12150
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Entry
IM25_12150 CDS
T05434
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM25_12150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_12150
Enzymes [BR:
rhq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
IM25_12150
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IM25_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOD22269
LinkDB
All DBs
Position
complement(2615235..2615801)
Genome browser
AA seq
188 aa
AA seq
DB search
MGFTRAELESFRDAVIPDLVAPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALFRAGI
VDRPIDASSGMSDADRDHLLERGVGITNLAPRATARADELTDEELREGGRHLAHVVAQFR
PRAVAVAGITAYRAAFGRRKAKAGRQDDTIGDVPLWVVPNPSGLNAHETVESLARAYAEP
ARAAGILS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcacacgagccgaactcgagtccttccgcgatgcggtgatccccgatctcgtc
gcgcccggttgccgcctgttgttcgtcggcatcaatccgggattgtggaccgcggcgacg
ggagcccacttcgcgcggcccggaaatcgcttctaccccgccctgttccgtgccggcatc
gtcgaccggccgatcgacgcgtcgtccggtatgagcgacgccgaccgcgatcacctgctc
gagcggggtgtcggcatcacgaacctggcgccgcgtgcgacggcccgcgccgacgagctc
accgacgaggaactgcgtgagggcggacgccatctggcgcacgtggtggcgcagttccgc
cctcgcgccgtggcggtcgcgggcatcaccgcctaccgcgcggccttcggccggcgcaag
gcgaaggccgggcggcaggacgacacgatcggtgacgtcccgttgtgggtggtgcccaat
ccgagcgggttgaacgcccacgagacggtggagtcgctggcgcgggcctacgccgaaccg
gcccgggcggccggcatcctgtcctga
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integrated database retrieval system
