Rhodococcus sp. p52: IM25_12600
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Entry
IM25_12600 CDS
T05434
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00061
Fatty acid biosynthesis
rhq00071
Fatty acid degradation
rhq01100
Metabolic pathways
rhq01212
Fatty acid metabolism
rhq02024
Quorum sensing
rhq04146
Peroxisome
Module
rhq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IM25_12600
00071 Fatty acid degradation
IM25_12600
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IM25_12600
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM25_12600
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhq01004
]
IM25_12600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhq04147
]
IM25_12600
Enzymes [BR:
rhq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IM25_12600
Lipid biosynthesis proteins [BR:
rhq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IM25_12600
Exosome [BR:
rhq04147
]
Exosomal proteins
Exosomal proteins of breast milk
IM25_12600
Exosomal proteins of breast cancer cells
IM25_12600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AOD22344
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All DBs
Position
complement(2713110..2714912)
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AA seq
600 aa
AA seq
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MSEIAVPQSFSIPENTSMADSVFRHEKESPEFVPFERLVDGKWVPVTARQFASEVRAVAK
GLIASGIELGDRVAVLSATRYEWVLLDYAIWAAGGATVAIYETSSADQAQWILEDSGTKL
LIVENSGHVDTVREVAENAPTVREILQIEPAPGGKSAVDELIARGAAVTDEQVEERRNSV
TAESAATLIYTSGTTGRPKGVQLKHRHFASESAACGLALPDSMHEGQRTLLFIPMAHVFA
RLISFAAFDSKVTVGHTSDLTTLLDQFAVFKPNFILSVPRVFEKVYNSAKQKAYDGGKGK
IFEKASEVAIEYSKALENGGPGLGLKIQHFVFDKLVYGKLKAALGGNVTRAVSGGAALGA
RLGHFFRGVGVTIYEGYGLTETTGGIIMNTPAAQKIGTVGTPFNGCAAKIAEDGELLLKG
PQVFDGYWQNDKATDEAIRDGWFHTGDIGAIDEDGFISITGRKKELIVTAGGKNVAPAVL
EDSLRAHPLISQVIVVGDSKPFVGALITLDPEALPGWLERHGLPAETTVADLIKNPDLIA
EIDEAVAETNKKVSKAEAIRKYRLLETDFSVESGELTPTLKLKRNIIHDKHGAEIAAIYN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagattgccgtaccacagtcgttctcgattcccgagaacacgtcgatggccgac
agcgtcttccggcacgagaaggagtcgcctgagttcgtgccgttcgagcgactggtcgac
ggcaagtgggttcccgtcaccgcccgccagttcgcatccgaggtgcgcgccgtggcgaag
ggcctgatcgcgtcgggtatcgagctcggcgaccgcgtcgcggtcctgtcggcgacgcgc
tacgaatgggtcctgctcgactatgccatctgggccgcgggcggtgccaccgtggcgatc
tacgagacgtcgtcggccgaccaggcccagtggatcctcgaggactccgggaccaagctg
ctcatcgtcgagaactccggtcacgtcgacaccgtccgcgaggtcgccgagaacgccccg
accgtgcgcgagatcctgcagatcgagccggcgccgggcggcaagagcgcggtcgacgag
ctcatcgcacgcggcgcagcggtcaccgacgagcaggtcgaggaacggcgcaactcggtc
acggccgaatccgcggcgaccctcatctacacctccggcaccacgggccggccgaagggc
gtccagctcaagcaccgccacttcgcctcggagtccgcagcctgcggcctggccctgccc
gactcgatgcacgagggccagcgcaccctgttgttcatcccgatggcacacgtcttcgcg
cgcctgatctcgttcgcggcattcgacagcaaggtcaccgtcggtcatacctccgacctg
acgacgctgctcgaccagttcgcggtcttcaagccgaacttcatcctctcggtgccccgc
gtgttcgagaaggtctacaactcggcgaagcagaaggcctacgacggcggcaagggcaag
atcttcgagaaggcctcggaggtcgcgatcgagtacagcaaggccctcgagaacggcggc
cccggcctcggcctgaagatccagcacttcgtcttcgacaagctggtctacggcaagctc
aaggccgcgctcggcggcaacgtcacccgggccgtctcgggcggcgccgcactcggcgca
cgtctcggccacttcttccgcggtgtcggcgtcaccatctacgagggttacggcctgacg
gagaccaccggcggcatcatcatgaacaccccggccgcccagaagatcggcaccgtcggc
acgccgttcaacggctgcgccgcgaagatcgccgaggacggcgagctcctcctcaagggc
ccccaggtgttcgacggctactggcagaacgacaaggccaccgacgaagccatccgcgac
ggctggttccacaccggcgacatcggtgcgatcgacgaggacggcttcatctcgatcacc
ggccgcaagaaggaactcatcgtcaccgcgggcggcaagaacgtcgccccggccgtcctc
gaggattcgctgcgcgcccacccgctgatcagccaggtcatcgtggtcggtgattccaag
ccattcgtcggcgcgctgatcaccctcgatccggaggcgctgccgggctggctcgagcga
cacggtctgccggcggaaaccacggtcgccgatctgatcaagaaccccgacctgatcgcc
gagatcgacgaggcggttgccgagaccaacaagaaggtctcgaaggccgaggcgatccgc
aagtaccgcctcctcgagaccgatttcagcgtcgagagcggcgagctgaccccgacgctc
aagctcaagaggaacatcatccacgacaagcacggcgccgagatcgcagcgatctacaac
tga
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