Rhodococcus sp. p52: IM25_15625
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Entry
IM25_15625 CDS
T05434
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00300
Lysine biosynthesis
rhq00470
D-Amino acid metabolism
rhq01100
Metabolic pathways
rhq01110
Biosynthesis of secondary metabolites
rhq01120
Microbial metabolism in diverse environments
rhq01230
Biosynthesis of amino acids
Module
rhq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IM25_15625
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IM25_15625
Enzymes [BR:
rhq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IM25_15625
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Paralog
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AOD22856
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Position
3374380..3375246
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AA seq
288 aa
AA seq
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MEFSKGHGTENDFVILPDPDARLDLDAGRIAALCDRRRGLGADGVLRVARAGALVSAGAL
GELPEGTDADDWFMDYRNGDGSIAEMCGNGVRVFAHYLTAHGFEDRREFVVGSRAGGKPV
TVHETGPVLGEVTVDMGTVRTLGESAATIDGRVYPGIGIDVGNPHLACVDPHLNDTSLAG
LDLTSPGFDPGFFPHGVNIEFLTPIAAGTVHMRVHERGVGETRSCGTGTVAAAAAALRFD
GASDGAVQVRIPGGSVEVRIENGRAWLRGPSVLVATGELDDTWWSAPI
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagcaaagggcacggaaccgagaacgacttcgtgatccttccggatcccgac
gcccgcctggacctcgacgcaggccggatcgcggccctgtgcgaccggcgtcgcgggctc
ggcgccgacggtgtgctccgcgtggcccgggccggggcactggtgtcggccggcgcgctc
ggagaactgcccgagggcaccgacgccgacgactggttcatggactaccgcaacggcgac
ggatccatcgccgagatgtgcggcaacggtgtgcgggtgttcgcgcactatctgaccgcg
cacgggttcgaggaccgccgcgagttcgtcgtcggcagccgggcgggaggcaagcccgtc
accgtgcatgagacaggaccggtcctcggcgaggtgaccgtggacatggggacggtgcgc
accctcggcgagtcggcggcgaccatcgacgggcgggtctatccgggcatcggcatcgac
gtcggcaacccgcacctcgcgtgcgtggacccgcacctgaacgacacgagccttgccggt
ctcgacctcacctcgcccggcttcgacccgggcttcttcccgcacggggtcaacatcgag
ttcctgaccccgatcgcggccgggacggtccacatgcgcgtccacgaacgcggcgtgggg
gagacccgctcgtgtggaaccggcacggtggccgcggctgctgcagccctgcgcttcgac
ggcgcatccgacggcgcggtgcaggtgcggatccccggtggctcggtcgaggtgcgcatc
gagaacggtcgcgcctggttgcgcgggccgtctgtgctggtcgcgacgggtgaactcgac
gacacctggtggtcggcgccgatctga
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