Rhodococcus sp. p52: IM25_16390
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Entry
IM25_16390 CDS
T05434
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM25_16390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhq03021
]
IM25_16390
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_16390
Enzymes [BR:
rhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM25_16390
Transcription machinery [BR:
rhq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM25_16390
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM25_16390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AOD22978
LinkDB
All DBs
Position
3535373..3535675
Genome browser
AA seq
100 aa
AA seq
DB search
MSSIQAAATDLEGNTLPVYDTPTGITNPPIDELLERASSKYALVIYAAKRARQINDYYNQ
LGDGILEYVGPLVEPGLQEKPLSIALREIHSDLLEHTEGE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcatccaggcagccgcgaccgacctcgagggcaacacccttccggtctacgac
acccccacgggtatcaccaacccgcctatcgacgagctgctcgagcgcgcctcctcgaag
tacgcgctggtgatctacgccgccaagcgggcacgccagatcaacgactactacaaccaa
ctcggcgacggcatcctcgagtacgtcggccccctcgtggagccgggtctgcaggagaag
ccgctgtcgatcgccctgcgcgagatccactcggatctgctcgagcacaccgaaggcgag
tga
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integrated database retrieval system
