Rhodococcus sp. p52: IM25_20675
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Entry
IM25_20675 CDS
T05434
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhq
Rhodococcus sp. p52
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhq03032
]
IM25_20675
03036 Chromosome and associated proteins [BR:
rhq03036
]
IM25_20675
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_20675
DNA replication proteins [BR:
rhq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IM25_20675
Chromosome and associated proteins [BR:
rhq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IM25_20675
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IM25_20675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Carla_C4
Motif
Other DBs
NCBI-ProteinID:
AOD23696
LinkDB
All DBs
Position
complement(4472499..4473215)
Genome browser
AA seq
238 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATAAVEHIVDAIVRAVHDGKSVTITGFGVFEKRRRAARVA
RNPRTGETVKVKPTSVPAFRPGQSFKNIIAGTQKLPASGPAVKRGAAAAAKKTAAAKKAA
KKTTAAKKTTATKSTAAKKTTAAKKTTAAKKTTATKSTPAKKTTAAKKTTAAKSTPAKKT
AATKSTAAKKTTAAKKTTAAKSTPAKKTAATKSTAAKKTTAAKKSPAKKTTARKSTKK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaactgatcgacgttctgaccgagaaactcggttcggacaggcgcacc
gccaccgcggccgtcgagcacatcgtggacgcgatcgttcgcgccgtgcacgacggtaag
agcgtcaccatcaccggattcggtgtcttcgagaagcgtcgtcgggccgcgcgtgtcgcg
cggaacccgcgcacgggtgagacggtcaaggtcaagccgacctcggtgccggccttccgt
cccggccagtccttcaagaacatcatcgcgggcacccagaagctcccggcttcgggtccg
gccgtgaagcgcggtgcagctgcagcggccaagaaaaccgcggcagcgaagaaggcggcg
aagaagaccacggcggcgaagaagaccacggcgaccaagtcgaccgcggcgaagaagacc
accgcggcgaagaagaccaccgcggcgaagaagaccaccgccaccaagtcgactccggcg
aagaagaccaccgcggcgaagaagaccacggcggccaagtcgactccggcgaagaagacc
gccgccaccaagtcgaccgcggcgaagaagaccaccgcggcgaagaagaccacggcggcc
aagtcgactccggcgaagaagaccgccgccaccaagtcgaccgcggcgaagaagaccacc
gcggcgaagaagagcccggccaagaagaccacggcccgcaagagcaccaagaagtaa
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