Rhodococcus sp. p52: IM25_22330
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Entry
IM25_22330 CDS
T05434
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00020
Citrate cycle (TCA cycle)
rhq00190
Oxidative phosphorylation
rhq00650
Butanoate metabolism
rhq00720
Other carbon fixation pathways
rhq01100
Metabolic pathways
rhq01110
Biosynthesis of secondary metabolites
rhq01120
Microbial metabolism in diverse environments
rhq01200
Carbon metabolism
Module
rhq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhq_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IM25_22330
00650 Butanoate metabolism
IM25_22330
09102 Energy metabolism
00190 Oxidative phosphorylation
IM25_22330
00720 Other carbon fixation pathways
IM25_22330
Enzymes [BR:
rhq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IM25_22330
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AOD23975
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All DBs
Position
4802640..4804391
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDITLTETENGPVATGV
VAYELATGEIHVFHAKAIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHLGEDVLEEKLPDITEFSRTYLGVDPVTELVPVFPTCHYVMGGIP
TNVDGEVLRDNENVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANS
TKHVEMPEQPTKYVDDWLDLILHQGGKERVADIRTELQQTMDNNASVFRTEETLTQALND
IHELKKRYKEITVHDKGKRYNSDLLEALELGFLLEMAEVTVVGALNRKESRGGHAREDYP
KRDDENFLKHTMAYKVGEELISDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacatcgttacgacgtagtcatcgtcggcgccggcggcgccggcatgcgtgcg
gccatcgaagccggcccgcgtgcgcgcaccgcagtgctcacgaagctctaccccacccgc
agccacaccggcgccgctcagggtggcatgtgcgccgccctcgcgaacgtcgaagaggac
aactgggagtggcacaccttcgacaccgtcaagggtggcgactacctggtcgaccaggac
gctgcggagatcatggccaaggaggccatcgacgccgttctcgacctcgagaagatgggt
cttccgttcaaccggacgcccgagggcaagatcgaccagcgtcgcttcggtggtcacacc
cgcgaccacggtaaggccccggtccgtcgcgcgtgctacgccgccgaccgcaccggccac
atgattctgcagacgctgtaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgcactcgacatcaccctcaccgagaccgagaacggtcccgtcgcgacgggtgtc
gtcgcgtacgagctcgcgaccggcgagatccacgtcttccacgccaaggccatcgtcttc
gcgacgggcggctcgggccgtatgtacaagacgacgtcgaacgcccacaccctcaccggt
gacggcctcggcatcatcttccgcaagggcctcccgctcgaggacatggagttccaccag
ttccatccgacgggcctggccggtctcggcatcctcatctcggaggccgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcgccccgcgacatcgtcgcccgctcgatggtgctcgaggtgctcgagggt
cgcggcgccggaccgaacaaggattacgtctacatcgacgtgacccacctcggcgaggac
gtcctcgaggagaagctccccgacatcaccgagttctcccgcacctacctcggtgtcgac
cccgtcaccgagctcgtgcccgtgttcccgacctgccactacgtcatgggcggtatcccg
accaacgtcgacggcgaggtcctccgcgacaacgagaacgtcgtgcccggcctgtacgcg
gccggcgagtgcgcgtgcgtgtccgtccacggcgccaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggtcgtcgcgccggcatcgccgccgcggagtacgccaacagc
acgaagcacgtcgagatgcccgagcagccgacgaagtacgtcgacgactggctcgatctg
atcctgcaccagggcggcaaggagcgggtggccgacatccgcaccgagctgcagcagacg
atggacaacaacgcgtcggtgttccgcaccgaggagacgttgacgcaggcgctcaacgac
atccacgagctgaagaagcgctacaaggagatcacggtccacgacaagggcaagcgctac
aacagcgacctgctcgaggctctggagctcggcttcctcctcgagatggccgaggtcacc
gtcgtcggcgcgctgaaccgcaaggaatcgcgtggcggacacgcccgcgaggactacccg
aagcgcgacgacgagaacttcctcaagcacaccatggcgtacaaggtgggcgaggaactg
atctccgacattcgcctggactacaagccggtggtccagacccggtacgagcccatggag
cgtaagtactga
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