Rhodococcus sp. p52: IM25_22490
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Entry
IM25_22490 CDS
T05434
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM25_22490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_22490
Enzymes [BR:
rhq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IM25_22490
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IM25_22490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOD24004
LinkDB
All DBs
Position
complement(4836108..4837022)
Genome browser
AA seq
304 aa
AA seq
DB search
MRIATFNINGIRAAQRRGFEDWLRERNPDVVALQEVRAPAAAIPQGVFGKYHLAYDEGTL
PGRNGVGILTLHEPAAVRTWSGTALLRLPGEEHVDRIEFDRGALARGLSEFAHEGRYVEV
DLADAPITVASLYLPKGGLPAHLQKPGRMRDEPDGGMRYQRKMRFLSAFARQLTRSRLAA
RAQGREFLIMGDFNVAHTRYDVRNWRRRGQAEGFLPEERAWFDSLLSPRTLVDVVRRHHP
EVDGPYSWWSWLGESFASDSGWRIDYHLATPRLARTAISAGTDRDPAPDRRISDHAPVVV
DYDI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatcgcgaccttcaacatcaacggaatccgcgccgcacagcgccgcggattcgag
gactggttgcgtgagcgcaaccccgacgtggtggccctgcaggaggtacgcgccccggcg
gctgcgatcccgcagggagtcttcggcaagtaccacctcgcctacgacgagggcaccctt
cccggccgcaacggcgtcggaatcctgaccctgcacgaacctgccgccgtgcgcacctgg
agcggcaccgcactgctgcgacttcccggtgaggaacacgtcgaccggatcgagttcgat
cggggagcgctggcacgcggactgtccgaattcgcccacgaggggcggtacgtcgaggtg
gatctcgccgacgcaccgatcaccgtggcgtcgctgtacctgccgaagggcgggctcccg
gcgcacctccagaagcccgggcgcatgcgcgacgaaccggacggtgggatgcgctaccaa
cgcaagatgcggttcctgtcggccttcgcccggcagctgacccgtagccgactcgcggcg
cgcgcccaggggcgggagttcctgatcatgggtgatttcaacgtcgcccacacgcgctac
gacgtgcgcaactggcggcgtcgcgggcaggccgagggcttcctgcccgaggaacgcgcc
tggttcgattcactgttgtcgccgcgcacgctcgtcgacgtcgtccgccggcatcatccc
gaggtcgacggtccctactcgtggtggtcgtggctgggggagtcgttcgcctccgattcc
gggtggcggatcgactaccacctcgccacgccgcgactggcccggaccgcgatctccgca
gggaccgaccgcgatccggcgccggaccggaggatcagcgatcacgcgccggtcgtcgtg
gactacgacatctga
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