KEGG   Rhodococcus sp. p52: IM25_24015
Entry
IM25_24015        CDS       T05434                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhq  Rhodococcus sp. p52
Brite
KEGG Orthology (KO) [BR:rhq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhq02048]
    IM25_24015
Enzymes [BR:rhq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     IM25_24015
Prokaryotic defense system [BR:rhq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   IM25_24015
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AAA_22 T1RH-like_C DUF883
Other DBs
NCBI-ProteinID: AOD24816
LinkDB
Position
pDF01:28854..31949
AA seq 1031 aa
MSDVGQVERKTQDRVVALFRDQLGYEYLGNWGARVGNANIETALLTASLKARGYDVPLIN
RALDQLGKAAAVGAGHGLYEANREVYGLLRYGVKVRPGFGEQTETVWLIDWKNPHANHFA
IAEEVTVAGQHTKRPDLVLYVNGLALATLELKRSKVAVSEGIRQSIGNQRPEFIGSFFST
LQFVFAGNDVEGLRYGVLDTPEKYWLEWKEPSEIPNPLDRGLVQLCRRERLLELIHDFIV
FDIGVKKAPRHNQYFGVKAAQARIAQREGGIIWHTQGSGKSLTMVWLAKWIRENQLDPRV
LLITDRTELDEQIERVFQGVNEHVYRTTSGADLIGTLNTSEHWLICSLIHKFRGTDTGKG
ADEEATAKFIQELRATVPKDFKAKGNIFVFVDEAHRTQSGAMHEAMKQLLPGAMFIGFTG
TPLLKADKATSIETFGTFIHTYKFDEAVTDGVVLDLRYEPRHIDQQLTAAAQVDAWFDAK
TKGMTDLSKAELKKRWGTMQKVLTSKSRAEKIVSDILLDMETKPRLMDGRGNAMLVGSSI
YQACKFYDMFVAAGFKGKCAIVTSYTPNASDVAKEDAGVGDTEKRFQYDTYCRMLADFFG
EPVDTVTTPAKVEAFEQAVKRQFRENPGQMRLLIVVDKLLTGFDAPSATYLYIDKKMRDH
GLFQAICRVNRLDGDDKDYGYIVDYQDLFNSLESAITDYTSGALDGYEKQDIDGLLSDRI
DKAREKLDDALERVRALVEPVAPPKGTLQYQQYFCALEPGTSEQLKANEPKRVELYKSIA
AAVRAYGNLANEMTDAGYPPAEADTIRQEVAHYVDVRAEVKLGAGENIDFKQYEAGMRYL
LDTYIQADASQIVANFADTGLIELIVQHGAGAIDTLPPGIKKNPEAVAETIVNNIRQVIV
DEHALNPKYYDSMSTLLDAILDERRRQALDYQQYLTQLIDTAKKIGTQDSGTTSPEWADN
GARRALIDFGFDDPATPIQIDTAILTSKPHDWVGHPMKEKVVKRALHKVLPPDFDRMDEL
FDLIKARDEYH
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgagtgacgtcgggcaggtcgagcgcaagacccaggaccgggtggtggcgctgttccgt
gaccagttgggctacgagtatctcgggaactggggggcgcgtgtcggtaacgcgaacatc
gaaaccgcgttgctgaccgccagcttgaaggcccgcgggtacgacgtcccgctcataaac
cgggcccttgatcagctcggcaaggccgcggcggtcggtgccgggcacggcctgtacgag
gcgaaccgggaggtgtacgggttgctgcgctacggggtgaaggtgcgccccgggttcggt
gaacagaccgagacggtgtggctgatcgactggaagaacccgcacgcgaaccatttcgcg
atcgccgaggaagtcaccgtcgctgggcagcacaccaagcgccccgacctcgtgctgtac
gtcaacgggctggccctggccaccctggaactcaaacgctcgaaggtggcggtgtcggag
ggaatccggcaaagcatcggcaatcagcgcccggagttcatcggctcgttcttctccacc
ctgcagttcgtgttcgccggcaacgacgtcgaaggcctgcgctacggggtgctcgacacc
ccggaaaaatactggctggagtggaaagaaccctccgaaatccccaatccccttgaccgc
gggctggtgcagctgtgccgcagagagcgactgctcgagctgatccacgacttcatcgtc
ttcgacatcggggtgaagaaggcaccccgacacaaccagtacttcggggtcaaggccgcc
caggcacggatcgcccagcgtgagggcggcatcatctggcacacccagggctcgggcaag
tccttgacgatggtgtggctggcgaagtggatccgggagaaccagctggatccgcgggtg
ctgctgatcaccgaccgcaccgaactcgacgaacagatcgaacgagtcttccagggcgtc
aacgagcacgtctatcgcaccaccagcggcgcggatctgatcggcaccctcaataccagc
gagcactggctgatctgttcgctgatccacaagttccgcggcaccgacaccggcaaaggc
gcggacgaggaggccacggcgaagttcatccaggaactgcgcgccaccgtcccgaaagac
tttaaggccaagggcaacatcttcgtgttcgtcgacgaggcacaccgcacccaatcgggg
gcgatgcacgaggcgatgaaacagctgttgccgggtgcgatgttcatcgggttcaccggc
accccgctgctcaaggcggacaaggccaccagcatcgaaacgttcggtacgttcatccac
acctacaagttcgacgaggccgtcaccgacggcgtggtgctcgatctgcgatacgagccc
cgccacatcgaccaacagctcaccgctgcggcccaggtcgatgcgtggttcgacgcgaaa
accaagggcatgaccgacctgtcgaaggcggagctgaagaaacggtggggcaccatgcag
aaggtcctcacgagcaagtcgagggccgagaagatcgtctccgacatcctgctcgacatg
gaaaccaaaccccgcctgatggacggtcgcggcaacgccatgctggtgggctcgagcatc
tatcaggcctgcaagttctacgacatgttcgtcgctgcaggcttcaagggcaagtgtgcc
atcgtcaccagctacacccccaacgcgagcgatgtggcgaaggaagacgccggggtaggg
gataccgaaaaacgcttccagtacgacacctactgccggatgctcgccgacttcttcggc
gaacccgtcgacacggtgaccaccccggccaaggtcgaggctttcgagcaggccgtcaag
cgccagttccgcgaaaatcccgggcagatgcggctgctgatcgtcgtcgacaagctcttg
accggtttcgatgccccgtcggcgacatatctgtacatcgacaagaagatgcgcgatcac
ggtctgttccaggcgatctgccgcgtcaaccggctcgacggggacgacaaggactacggc
tacatcgtcgactaccaggacctgttcaactccctcgaatcggccatcaccgactacacc
tccggcgccctggacggctacgagaaacaagacatcgacgggctgctgtcggaccgcatc
gacaaagcccgcgagaagctggacgacgcgctcgagcgagttcgggcacttgtcgaaccc
gtcgctccacccaagggcacactccagtaccagcagtacttctgtgcgctcgaacccgga
accagtgagcagctcaaggcgaatgaacccaaacgcgtcgagctgtacaagtcgatcgcc
gccgcggtgcgggcgtacggcaacctcgccaacgagatgaccgacgccggctaccccccg
gccgaagccgacacgatccgccaagaggtcgcccactacgtcgatgtgcgagccgaggtg
aaactcggcgccggcgagaacatcgacttcaaacagtacgaggccgggatgcggtacctg
ctcgacacctacatccaagccgatgcctcccagatcgtggcgaacttcgccgacaccggg
ctgatcgagctgatcgtccagcacggcgccggggccatcgacaccctcccaccggggatc
aagaagaaccccgaggcggtggcggagacgatcgtcaacaacatccggcaggtgatcgtc
gacgaacacgccttgaatccgaagtactacgactccatgagcaccctgctcgacgcgatc
ctcgacgaacgccgccgccaagccctcgactaccagcagtacctgacccagctgatcgac
accgcgaaaaagatcggcacccaggactccggcaccacctcccccgagtgggccgacaac
ggcgcccgccgcgccctgatcgacttcggattcgacgatccggccacaccgatccagatc
gacaccgcgatcctgaccagcaaaccccacgactgggtcggccaccccatgaaagaaaaa
gtcgtcaaacgcgcccttcataaggttctgcccccagacttcgacaggatggacgagctg
ttcgacctgatcaaggcccgcgatgagtaccactaa

DBGET integrated database retrieval system