Rhizobium sp. 11515TR: CKA34_00335
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Entry
CKA34_00335 CDS
T06097
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhr03016
]
CKA34_00335
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CKA34_00335
Transfer RNA biogenesis [BR:
rhr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CKA34_00335
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ASW04514
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All DBs
Position
complement(63572..64168)
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AA seq
198 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVDRLDR
IDRPEFQLRLEGIGSFGSKKPHSVWAGVSQTPDMFALQGEIERICQRIGLQPDPRKFTPH
VTLARLKSSRVDDVVHYLSGRGNFYTQPFTVGRFVLLSSRESVGGGPYLTEEIFPLHEPR
STFPTLGNNALQPAKSMV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactttttaccgccctcgaaattccgcgcaatgcggccatgagcctgtcattg
ttgcgcggtggtctcccgggagccaggtggatcgacgttgaaaattatcacatcaccttg
cgcttcatcggcgatgtcgatggccgcacggcggatgagatcgtcgaccgtctggaccgg
atagatcgacctgaattccagcttcggctggagggcatcggttccttcggctctaagaaa
ccgcattcggtttgggccggggtctcgcagacaccggatatgttcgcgctgcaaggcgag
atcgagcgcatttgccagcggatcggcctgcagccggatccgcgcaagttcacgccgcac
gtgacgctcgccaggctaaagtcctcgcgggtcgacgatgtcgtgcactatctatccggc
cgcggcaatttctatacccagcccttcacggtcgggcgcttcgtgcttctgtcgtcgcgc
gaatcggtcggtggcggtccctatctcaccgaagagatattcccgcttcacgagccccgc
agcacgttcccaactttgggcaacaacgcgctgcagccggccaagagcatggtgtaa
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