KEGG   Rhizobium sp. 11515TR: CKA34_00450
Entry
CKA34_00450       CDS       T06097                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rhr  Rhizobium sp. 11515TR
Pathway
rhr02024  Quorum sensing
rhr03060  Protein export
rhr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CKA34_00450
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKA34_00450
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKA34_00450
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhr02044]
    CKA34_00450
Enzymes [BR:rhr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CKA34_00450
Secretion system [BR:rhr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CKA34_00450
  Eukaryotic Sec-SRP protein
   CKA34_00450
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 AAA_30 AAA_19 Zeta_toxin AAA_33 DnaB_C AAA_25 AAA_16 AAA_14 AAA_31 Thymidylate_kin TctA AAA_17 ResIII AAA NACHT ATPase APS_kinase ArsA_ATPase nSTAND3 ATPase_2 ATP_bind_1 AAA_7
Other DBs
NCBI-ProteinID: ASW04535
LinkDB
Position
86079..87656
AA seq 525 aa
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAEILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLNAPAPVVVMVVGLQGSGKTTTTAKI
ANRLTSRDRKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIISGQSPTDIAARAVQAAK
LGGHDIVILDTAGRTHIDEPLMVEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMGELEEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKAAAMAAKMAKGKFDLNDLADQLGQMQKMGGMGGIMGLMPGMSGMK
DKMAAAGLDDRLFKRQLAIISSMTKAERANPDLLKHSRKKRIAAGSGTDASDINKLLKMH
RQMADMMKMMGGKGKGGMMKQLMGGLAGKMGLGGGMGGMPDLSNMDPKQLEALQKQAEAA
GLGRPGGLPGGLPGLGGGGLPGLGGAKLPGLGGGFPGLPGLPKKK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctccaggaccgtcttggttccattctgaatggactgacaggccgcggc
gcgctttcggaagccgatgtttccgcagcgctgcgcgaggttcgccgcgcgctgctcgaa
gccgacgtggcgctggatgtcgtgcgatcctttaccgatcgcgtccgcgaaaaggccgtc
ggcgccgaaatcctgaagtcgatcaagcccggtcagatggtcgtcaagatcgtccatgac
gagctgatcgagatgctcggcggcgaaggcgtcggcatcgatctgaatgcgcccgccccg
gtcgtcgtcatggtggtcggtctgcagggctccggtaagaccaccacgacggccaagatc
gccaaccgcctgacgagccgcgaccgcaagaaggtcctgatggcctcgctcgacacgcgc
cgcccggcggcgcaggagcagctgcgtcaactcggcgtccagaccggcgtcgacacgctg
ccgatcatatcaggccaatcgccgaccgatattgccgcccgcgccgtgcaggccgccaag
ctcggcggccatgacatcgtcatcctcgacaccgccggccgtacgcatatcgacgagccg
ctcatggtcgagatggcggatatcaagaagaagtccaatccgcacgaaatcctgctggtc
gccgatagcttgaccggtcaggacgccgtcaacctcgcccgcaatttcgacgagcgcgtc
gggattaccggcctcgtgctgacccgcatggacggcgatggccgcggcggtgcggccctt
tcgatgcgcgcagtcactggcaagccgatcaaactgatcggtgtcggcgaaaagatgggc
gagctggaggaattccatccccgccgtatcgctgaccgcatcctcggcatgggcgacatc
gtctcgctcgtcgagaaggctgccgagaatatcgacgccgagaaggcggccgccatggct
gccaagatggccaagggcaagttcgacctcaacgatctcgccgaccagctcggccagatg
cagaaaatgggcggcatgggcggcatcatgggcttgatgcccggcatgtccggcatgaag
gacaagatggccgccgccggcctcgatgaccgtctgttcaagcgccagctcgccatcatc
tcctcgatgaccaaggccgagcgcgccaatccggaccttttgaagcattctcgcaagaaa
cgcatcgccgccggctcaggcaccgacgcctccgacatcaacaagcttctgaagatgcac
cgccagatggccgacatgatgaagatgatgggcggcaagggcaaaggcggcatgatgaag
cagctgatgggcggccttgccggtaagatgggtctcggcggcggtatgggcgggatgccc
gacctgtcgaacatggatcccaagcagctcgaagccttgcagaaacaagccgaagccgcc
ggcctcggccgtcccggcggccttccgggtggtttgccgggcctgggcggcggcggtttg
ccgggtctcggcggcgccaagctgccgggccttggcggtggtttcccgggcctccccggt
ttgccgaagaagaagtga

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