Rhizobium sp. 11515TR: CKA34_02440
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Entry
CKA34_02440 CDS
T06097
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhr02000
]
CKA34_02440
01504 Antimicrobial resistance genes [BR:
rhr01504
]
CKA34_02440
Transporters [BR:
rhr02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CKA34_02440
Antimicrobial resistance genes [BR:
rhr01504
]
Gene variants
Tetracycline resistance genes
Transporters
CKA34_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
TRI12
MFS_4
Motif
Other DBs
NCBI-ProteinID:
ASW04866
LinkDB
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Position
complement(503945..505162)
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AA seq
405 aa
AA seq
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MNKMLLTILSVVVLDAAGTGLVMPILPELLQSVAHSPELGWRYGAFLSLYAALQFLASPI
LGTLSDRYGRRPVLLASLAGGMIDYAFMAWAPGFWWLFLGRAVAGLTAANAAVASACLAD
ITPEERRTRAFGLLSACFGVGFILGPVIGGVLGAISLRAPFVAAAFLVMVNFIVALVVLP
ETRTVRPERINLAAFHPLAPLRWIGAFPALVPLLFMSILLAIVGEVGGTVWVLYGQDKFG
WDTVTVGLSLAGFGLFHALAQAFVAGPLSERWGERCALVVAIVCDGAAYVAIAFVTQGFL
VFFLFPLFCLGGIGQPALLSLMTQRVGTDEQGRLQGVLTSLTSLASMIAPLAISEIYFAS
RHDFPGLVWILGASLYFLCMPMLFAKQQRTDEPLEGAAHRQSEQS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatgcttttgacgatcctttccgtcgtcgttctcgatgcggccggaaccggt
ctcgtgatgccgatcctgccggagcttctgcagagcgtggcccattcgcccgagctcggc
tggcgctatggcgccttcctgtcgctctacgcggcgctgcagtttctggcctctcccatt
ctcggaacgctgagcgatcgttacggccgccggccggtgctgctcgcctcgctggcgggc
ggcatgatcgactatgccttcatggcgtgggcaccaggtttctggtggctattcctcggc
cgcgccgtcgccggcctgacggccgccaacgccgcggttgcgagcgcctgccttgccgac
attacgccggaggagcgccggacacgcgctttcgggctgctcagcgcctgttttggcgtc
ggtttcattctcggaccggtcataggaggggtgttgggcgcgatctcgctacgcgcgcct
ttcgtcgctgccgcgtttctggtgatggtgaatttcattgtcgcgcttgtcgtgctgccg
gagacacgtactgtacggcctgaacggatcaatctggccgcctttcatccgctggcgcca
ctgcgttggatcggtgcgtttccggcgctggtgccgttgctcttcatgtccatcctcctt
gcaatcgtcggagaagtcggcggtaccgtctgggtgctctatggtcaggacaagttcggc
tgggatacggtgaccgtcggcctgtctctggctggcttcggcctgttccatgcgctcgcc
caggctttcgtcgccggccctttgagcgagcgctggggcgaacgctgcgcactcgtcgtc
gcgatcgtctgtgacggcgctgcctatgtcgccatcgccttcgtcacgcagggttttctc
gtcttttttctgtttccgcttttctgcctcggtgggatcggccagccggcccttctgtcc
ttgatgacccaacgcgtgggcaccgacgaacaggggcgcttgcaaggcgtgctgaccagc
ctgacgagccttgcctccatgatcgcgcccctggcgatcagcgagatctatttcgcatca
aggcatgactttcccggactggtctggatacttggcgcctcgctctatttcctctgcatg
ccgatgctcttcgcgaagcagcagcggacagatgagccactcgaaggcgcggcgcatcga
caaagcgagcaatcctga
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