KEGG   Rhizobium sp. 11515TR: CKA34_03420
Entry
CKA34_03420       CDS       T06097                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rhr  Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:rhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhr03016]
    CKA34_03420
Enzymes [BR:rhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CKA34_03420
Transfer RNA biogenesis [BR:rhr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CKA34_03420
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ASW05035
LinkDB
Position
713226..713852
AA seq 208 aa
MAATIRYHEGDISTEDAARYTGAIAIDTETLGLVPRRDRLCLVQLSPGDGTADIIRIAAG
QKQAPNLVAMLADPTHQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDVDISKAQQSSDWAAETLSPAQLEYAASDVLYLHALREKLTQRLLRDGRMDY
ADDCFAFLPTRAKLDLLGWEEADIFAHS
NT seq 627 nt   +upstreamnt  +downstreamnt
atggctgccaccatccgttatcatgaaggcgatatttccactgaggatgccgcacgctac
accggcgccattgccatcgataccgaaaccctcggcctcgttccacgccgggaccgactt
tgcctcgtgcagctttcgccgggcgacggtactgctgacatcatccgcatcgccgctggc
cagaagcaggcgcccaatctcgtcgccatgctcgccgacccgacgcatcagaagatcttt
cattacggccgcttcgacatcgccgtcctgttccatacgttcggcgttaccacgacgccg
gtcttctgcaccaagatcgcctcgcgtctctgccgtacctataccgaccgtcacggcctg
aaggacaatctcaaggagatgttggacgtcgatatttccaaggcgcagcaatcgtcagac
tgggcggcggaaacgctgtcgccggcgcagctcgaatatgccgcctccgacgtactttat
ctgcatgcgctacgggaaaagctgacgcaacgcctgctgcgcgatggccgcatggactat
gcggatgattgcttcgccttcctgccgacgcgcgccaagctcgaccttctcggctgggaa
gaggcggatatcttcgcgcacagctga

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