Rhizobium sp. 11515TR: CKA34_04795
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Entry
CKA34_04795 CDS
T06097
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CKA34_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_04795
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CKA34_04795
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CKA34_04795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
ASW05266
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Position
989994..991610
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AA seq
538 aa
AA seq
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MSSFFENDSPSNLTEYSVSELSGSIKRTVENAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSKLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMAL
LEERKRKLGAEGLFDPERKRRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPV
KVQGEGSGDEVANAIRGFNEFAQGGPIPRPDVLIVARGGGSLEDLWSFNDEAVVRAAAAS
EIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQLASLAARLQGGMTRQ
MDQRRQVVRALMRALPSLDQILALPRRRFDEAAAGLGRGLELNTLNKRRSFERTASHLRP
DILSNRIAERRQQLGERITRAERTIERMLDRSRARIERADAVFTTLPSRLEAQTGRARDR
LGSLVRHADTAIRHQLTRARSELTAQERILQSLSYKNVLKRGYAVVRDEDDRPVSLAAAL
STGAAISIEFADGRIGAVTGDDASPPSSSTPPSGTAPSKKRATKPAEPAAPPKQGSLF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttttttgagaatgattcgccttcgaacctgacggaatattccgtctcggag
ttgtcgggatcgatcaagcgcacggtcgagaatgcgttcgaccaagtgcgcgtgcgcggg
gaaatctccggctatcgcgggccgcattcctctggacatgcttatttctcgctgaaggat
gaccgggcgcgcatcgatgccgtgatctggaaaggcacattctccaagctgaaatttcgc
cctgaagagggaatggaggtcattgcaacaggcaaggtgacgaccttcccgggctcgtcg
aaataccagatcgtcatcgaaaccttggagcctgctggcgccggtgcactgatggcgctg
ctggaggaacgcaagcgcaagctcggtgccgaaggcctgttcgatcccgagcgcaagcgc
aggctgcctttcatgcccaaggtgatcggcgtggtcacgtcgccgaccggtgcggtcatc
cgcgatattctgcatcgcatctccgatcgcttccccgtgcatgtgctggtctggccggtg
aaggtacagggagagggctccggcgacgaggtggcgaacgccatacgcggcttcaacgaa
tttgcccaaggcggcccgattccgcgcccggacgtgctaatcgtcgcgcgcggcggcggc
agtctcgaggatctatggagtttcaacgatgaggctgtggtgcgtgccgctgccgcgagc
gagatcccattgatctcggccgtcggccacgagacagactggaccttgatcgactacgcc
gccgacgtgcgcgctccgacgccgacgggggctgccgaaatggccgttccggtcaaagcc
gagctcgaagcccagctggcgagcctcgcagcccggttgcaggggggaatgacgaggcag
atggatcaacgccggcaggttgtgcgtgcgctgatgcgcgccctgccatcgctcgaccag
attctggctctgccgcgccgccgcttcgatgaggcggctgctggccttggccgcggattg
gagctgaacacgctgaacaagcgccgctccttcgagcgcaccgcctcgcacctccgcccc
gatatcctgtcgaaccggatcgccgagcgacgtcagcaattgggcgaacggataacccgc
gcggagcggactatcgagcgcatgctcgaccggtcccgcgcccgtatcgaacgcgccgat
gccgtcttcaccacgttgccgtcgcgcctcgaagcgcagacggggagggcgcgcgaccgc
ctcggcagtctcgtccgtcatgccgatacggccatccgccatcagctaactcgagcgcgc
agcgaactcacggcgcaggagcgcattctgcagtcgctctcctacaagaatgttctgaag
cgcggctatgccgttgtgcgcgacgaggatgatcgcccagtttcgctggcggcagccctt
tcgacgggtgccgcgatctcgatcgagtttgctgatggccgcatcggggccgtcaccggc
gatgatgcctcgccaccgtcttcatccacaccgccatcaggcactgcgccttcgaagaag
cgtgccaccaaaccggcggagcctgccgctccaccgaagcagggaagcctcttctga
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