KEGG   Rhizobium sp. 11515TR: CKA34_05225
Entry
CKA34_05225       CDS       T06097                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
rhr  Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:rhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhr03016]
    CKA34_05225
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhr02048]
    CKA34_05225
Transfer RNA biogenesis [BR:rhr03016]
 Prokaryotic type
  tRNA degradation factors
   CKA34_05225
Prokaryotic defense system [BR:rhr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    CKA34_05225
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ASW05342
LinkDB
Position
complement(1068359..1068763)
AA seq 134 aa
MKFLLDSNAVIALMKGHPGFVSELRRHKPQDFAIPAIVAHELFYGAYKGQRVSENLARVD
ALQFETLDFDKQDARVAGEIRAALAFLGTPIGAYDVLIAGQAVARDLILITHNVREFERV
LKLRFEDWESLPSG
NT seq 405 nt   +upstreamnt  +downstreamnt
gtgaagtttctgctcgacagcaatgccgtcatcgctctgatgaaaggacaccccggcttt
gtcagcgagcttcgcagacataagccccaggatttcgccattccggccatcgtcgcacac
gagctgttttatggtgcctataaagggcagcgcgtttccgaaaatctggcacgtgtcgat
gccttgcaattcgagacgctggatttcgacaagcaagatgcccgtgtagctggcgaaatt
cgcgcggcccttgcttttcttggcacgccgatcggcgcttatgacgttctgatcgcggga
caagcggtcgcccgcgatctgatcctgataacgcacaatgtcagggagtttgaacgcgtt
ctcaagctacgtttcgaagactgggaatccttgccgagtggctaa

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