Rhizobium sp. 11515TR: CKA34_05435
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Entry
CKA34_05435 CDS
T06097
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CKA34_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_05435
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CKA34_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ASW05381
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Position
1111296..1114037
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AA seq
913 aa
AA seq
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MNERINASIDAFSAAELASEESRASATPMMEQYIEIKANNPGSLLFYRMGDFYELFFEDA
IDASRALGITLTKRGQHMGQDIPMCGVPVHAADDYLQKLIGLGFRVAVCEQVEDPAEAKK
RGGKSVVRRDVVRLVTPGTITEEKLLSPSESNYLMALTRIRGGAEPQLALAWIDISTGVF
RLAETETSRLLADILRIDPRELILPDTMFHDPELKPVFDILGRTAVPQPAVLFDSASAEG
RITRYFGVSTLDGFGTFSRAELAAAAAAIAYVEKTQLAERPPLGLPERESGASTLFIDPA
TRANLELVRTLSGDRNGSLLKAIDRTVTGGGARLLAERLMSPLTDPTRINERLDSIGFLT
EEPSLCSDLRSALKHVPDMPRALSRLALDRGGPRDLWAIRQGLAAAADLARLLGGALLPE
ELAAALAELKALPADLEAMLAAMLAEELPLLKRDGGFLREGANAELDEVRALRDQSRRVI
AGLQLQYAEETGIKSLKIKHNNVLGYFIEVTASNAGPMTETSEAKARFIHRQTMANAMRF
TTTELADLESRIANAADKALAIELEAFDRMVTAVVAAAEAIKTGARALSVIDVAAGLALL
AEEQAYCRPVVDGSRMFAIEGGRHPVVEQALRRQAGGPFVANNCDLSPKADGKDGAIWLL
TGPNMGGKSTFLRQNALIAILAQMGSFVPAASAHIGIVDRLFSRVGASDDLARGRSTFMV
EMVETAAILNQATERSLVILDEIGRGTATFDGLSIAWAAVEHLHEANRCRGLFATHFHEL
TVLSEKLGRLSNATMRVKEWDGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVARARDV
LTRLEDADRKNPASQLIDDLPLFQVAVRREEAGGRREPSKVEERLKTLDLDDLTPRAALD
VLYELKKTLTKSS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacgtattaacgccagcatcgatgctttctcggccgccgagcttgcctcggag
gaaagccgcgcctcggccactccgatgatggagcaatatatcgagatcaaggcgaacaat
cccggttcgctgctgttctatcgcatgggcgacttctacgaactgttcttcgaagacgcc
atcgatgcatcgcgtgcgctcggtatcacgctgacgaagcgcggccagcatatggggcag
gatatcccgatgtgcggtgtgccggttcacgctgccgatgattatctgcagaagctgatc
ggtctcggcttccgtgtcgccgtctgcgagcaggtggaagatccggccgaagccaagaag
cgcggcggcaaatcggtagtacggcgcgatgtcgtgcgtctggtgacgccgggcacgatc
accgaggaaaagctgctttcgccctcggaatccaattatctcatggcgctcacccgcatt
cgcggtggcgccgagccgcagttggcgcttgcctggatcgatatttcgacaggcgtcttc
cgtcttgcagaaacggagacgtcgcggctgctcgccgatatcctgcgcatcgatccgaga
gaactgatcctgccggatacgatgtttcatgatccggagctgaagccggttttcgatatc
cttggccggaccgctgttccgcagccggcggtgctcttcgacagcgccagcgctgaaggg
cggatcacccgttacttcggggtgtcgacgctcgatggtttcggcacgtttagccgggcg
gagcttgctgccgctgccgctgccatagcctatgtcgaaaagacccagcttgccgagcgg
cctccgctggggctgccggagcgcgaaagcggcgcttccacacttttcatcgatcccgcc
acgcgtgccaatctggaactggttcgcacgctttccggcgaccgcaacggctcgctattg
aaagcgatcgaccgcaccgtgaccggtggcggtgcccgccttctcgccgagcggctgatg
tcgccgctgaccgatcctacccgcatcaatgaacgcctggattcgatcggtttcctgacc
gaggagccgtcgctctgcagcgatctgcgttcggcgttgaagcatgtgcccgacatgccg
cgtgccctatcgcgccttgcgctcgatcgtggcggcccgcgcgatctctgggcgattcgg
caggggttggccgctgccgccgatcttgcccgacttctcggtggcgccttgctgccggag
gagcttgccgctgcattggccgagctgaaagctttgccagccgatcttgaggcgatgctg
gctgcgatgcttgccgaagagctgcccctgctgaaacgggacggcggtttcctgagggag
ggggcgaatgccgagctggacgaagtgcgggcattgcgcgaccagtcgcgccgcgtcata
gccggcctgcagctgcaatacgccgaagagaccggcatcaagtctctgaagatcaagcac
aataatgtgctcggctattttatcgaggtcacggccagcaatgccggtcccatgacggag
acgagcgaagccaaggcgcgcttcattcatcgccagaccatggcgaatgccatgcgcttc
accacaacagaacttgccgatcttgaaagccgcatcgccaatgctgcggacaaggcgctg
gctatcgaactcgaagccttcgatcgcatggttaccgccgtggtggccgctgccgaggcc
atcaagaccggtgcccgcgcgctgtcggtgatcgatgtcgcagccgggcttgcgctgctt
gccgaggagcaggcctattgccggcccgtcgtcgatggcagccggatgtttgctatcgaa
ggcggccgtcacccggtcgtcgagcaggcgcttcgccgtcaggccggcggacctttcgtc
gccaacaattgcgatctttcgccgaaagccgacggcaaggatggcgccatctggctgctg
accggcccgaatatgggcggtaaatcgaccttcctacgtcagaatgctttgatcgccatt
ctcgcgcaaatgggttccttcgtgcccgccgcttcggcccatatcggcatcgtcgaccgc
ctcttctcgcgcgtcggcgcttccgacgatctggcccgtggccgctcgaccttcatggtc
gagatggtcgagacggcggcgatcctcaaccaggcgacggaacgttcgcttgtgatcctc
gacgagatcggtcgcggcactgcaacctttgacggtctttccatcgcctgggcagccgtc
gagcatctgcatgaagccaaccgatgccgcggccttttcgccacccatttccacgagctg
accgtgctctcggagaagctcgggcggctttccaatgccaccatgcgcgtcaaggaatgg
gatggcgacgtcatcttcctgcatgaggtcggaccgggagccgccgatcgctcctacggc
attcaagtggcacgtctcgccggcctgccggcttccgtggtggcgcgcgcccgtgacgtc
ctgacgcggctcgaagatgccgatcgcaagaatccggcaagccagctcatcgatgacctg
cctctcttccaggtggccgtccgccgggaggaggccggtggccggcgcgagccttccaag
gtcgaggaacggctgaaaaccttggatctggacgatctgacgccgcgcgccgctctggac
gtgctctatgaactgaagaaaacgcttaccaaaagcagctga
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