Rhizobium sp. 11515TR: CKA34_05495
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Entry
CKA34_05495 CDS
T06097
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhr03016
]
CKA34_05495
Enzymes [BR:
rhr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CKA34_05495
Transfer RNA biogenesis [BR:
rhr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CKA34_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ASW05393
LinkDB
All DBs
Position
1124552..1125964
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AA seq
470 aa
AA seq
DB search
MTKDSLTLDAPAADALQLGSRDGFNSRKVFIKTYGCQMNVYDSTRMSDALSRDGYEPTED
MEEADLVLLNTCHIREKAAEKVYSALGRLREMKKRKAADGRDMMIGVTGCVAQAEGEEIL
RRAPAVDVVIGPQTYHRLPDALRRAKEGERVVDTEYAIEDKFEHLPIAEKTKIRARGVTA
FLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVDGGVREITLLGQNVNAWHGI
GPKGEAWSLGDLLYRLSEIPGLARLRYTTSHPRDMDDRLIGAHRDLRTLMPYLHLPVQAG
SDRILKAMNRRHTAAEYLTLIEKIRTARPDIALSGDFIVGFPGETDQDFEDTLKLIEEVN
YAQAFSFKYSTRPGTPGAELKDQVPEEVKTERLERLQALLLKQQHAFAEACVGKAVDILL
EKPGRMPGQLIGRSPWLQSVNVDAKASQIGDIINVRITGTSTNSLFAELL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggatagcctgaccctcgatgccccggcggccgacgctttgcagctcggttcc
cgcgacggcttcaacagccgcaaggtcttcatcaagacctacggctgccagatgaacgtc
tatgattccacgcggatgagcgatgcgctctcccgcgacggctacgagccgaccgaggac
atggaagaggccgatctcgtcctgttgaacacctgccatatccgcgagaaagctgccgaa
aaggtctattccgcgctcggccgcctgcgcgagatgaagaagcgcaaggccgccgacggt
cgcgacatgatgatcggcgtcaccggctgtgtcgcccaggccgaaggcgaggaaatcctg
cgccgtgcgcccgccgtcgatgtcgtcatcggcccgcagacctatcatcgcctgccggac
gcgcttcgtcgcgccaaggaaggtgaacgtgtcgtcgatacggaatatgcgatcgaggac
aagttcgagcatctgccgatcgccgaaaagacaaagatccgcgctcgcggcgtcaccgcc
ttcctgacggtgcaggaaggctgcgacaagttctgcaccttctgtgtcgtgccctatacg
cgcggctccgaagtctcccgcccggtctcccagatcgtcgaagaggccgagaagctggtg
gatggcggcgttcgcgagatcacgctgctcggccagaacgtcaacgcatggcacggtatc
ggcccgaagggcgaagcctggagcctcggcgatctcctctatcgcctgtcggaaatcccc
ggcctcgcgcggctgcgctacaccaccagccacccgcgcgatatggacgaccgcctgatc
ggcgcgcatcgcgacctgcggacgctgatgccctatctgcatctgccggttcaggccggc
tccgatcgcatcctgaaggcgatgaatcgaaggcatacagctgcggaatatctgacgctc
atcgagaagatccgtactgcgcgcccggatatcgctctttcgggcgatttcatcgtcggc
ttcccaggggagacagatcaggattttgaggatacactgaagcttatcgaggaggtgaat
tatgcacaggccttctcgttcaaatattccacgcggccgggcacacccggcgcggaattg
aaggatcaggtgcccgaagaggtcaagaccgagcggctggagcgtttgcaggcattgctg
ctgaagcagcagcatgcgtttgccgaggcttgcgtgggtaaagcagtggatatccttctg
gaaaagccgggccggatgccaggccagttgatcggacgctctccctggctgcaatctgtg
aatgttgatgcaaaagcatcgcaaatcggtgacattattaacgtacgaatcaccggaacc
agcaccaacagcctttttgctgaattgctctag
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