Rhizobium sp. 11515TR: CKA34_05585
Help
Entry
CKA34_05585 CDS
T06097
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhr03016
]
CKA34_05585
Enzymes [BR:
rhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKA34_05585
Transfer RNA biogenesis [BR:
rhr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKA34_05585
Prokaryotic type
CKA34_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Arginase
Motif
Other DBs
NCBI-ProteinID:
ASW05407
LinkDB
All DBs
Position
1142609..1143415
Genome browser
AA seq
268 aa
AA seq
DB search
MPRYKMTVEYDGIPYVGWQRQENGPSVQGAIEGAILSLTGETVSIRGAGRTDSGVHAMGQ
VMHADLSKEWKVYTLRNALNAHLRMAGDRIAILDIVEVAPRFDARFSAVRRHYLYRIIAR
RAPLALEAGRAWWVPKDMDHEVMHAAAQTLVGRHDFTTFRSAHCQANSPVRTLDRLDVTR
SGELIEIRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVRAALEARDRKACGPVAPPDGL
YFTQVDYRDGAGSAGNEGETIDDGDDLS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttacaaaatgactgtcgaatatgacggcattccctatgtcggatggcagcgt
caggaaaatggcccctcagtgcagggtgcgatcgaaggcgccatcctgtccttgaccggc
gaaaccgtttcgatccgcggggcgggacgcaccgattccggcgtgcatgccatggggcag
gtcatgcatgccgatctttccaaggaatggaaggtctatacgctgcgcaatgcgctcaat
gcccatctgaggatggccggtgaccgcatcgccattctcgatatcgtcgaggtcgcccca
cgcttcgatgcacgcttctcggccgtccgccgccactatctctatcgcatcatcgcccgc
cgcgcgccgcttgcactggaagccggtcgtgcatggtgggtgccgaaggatatggaccac
gaggtcatgcatgccgcggcgcagacccttgtgggacggcatgatttcaccaccttccgt
tcggcgcattgccaggcgaacagcccggtgcgcacgctcgaccggctggatgtgacgcgc
agcggcgagctgatcgagatccgcgccaccgcgcaaagcttcctgcacaatcagatccgc
tccttcgccggcacgctgaagctcgcgggcgagggcaaatggacgcctgacgatgtgcgc
gcggcgctggaagctcgggaccgcaaggcctgcggtcctgtcgctccgccggatgggctc
tatttcacgcaggtggattatcgtgacggtgccggttcggccggcaacgaaggggagact
atcgatgacggtgacgatctatcataa
DBGET
integrated database retrieval system
