Rhizobium sp. 11515TR: CKA34_05600
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Entry
CKA34_05600 CDS
T06097
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00300
Lysine biosynthesis
rhr01100
Metabolic pathways
rhr01120
Microbial metabolism in diverse environments
rhr01230
Biosynthesis of amino acids
Module
rhr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CKA34_05600
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhr01002
]
CKA34_05600
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CKA34_05600
Peptidases and inhibitors [BR:
rhr01002
]
Metallo peptidases
Family M20
CKA34_05600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ASW05410
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All DBs
Position
complement(1144393..1145586)
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AA seq
397 aa
AA seq
DB search
MTVTNPITNLQTLIRCASVTPAEGGALTVLAGMLQPLGFKIERMTASEPGTPDIENLYAR
LGTDGPHLMFAGHTDVVPVGDAASWSHPPFAAEIADGELFGRGAVDMKGGIACFVAAVAR
HIEKHGKPAGSISFLITGDEEGPAINGTVKLLQWAAERGETWDASLVGEPTNPDRLGDMI
KIGRRGSISGTITVHGVQGHAAYPHLADNPVRSIIKLTEALLDPPFDAGTDNFQPSNLEV
TTIDVGNAATNVIPAKATAAFNIRFNDTWTADTLKAEILARLDAAAADQTLRPGRPPAKY
DIVWSERPSQVFLTRNNALIASLSSAIENITGQRPALSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMIDERVALSDLETLTGIYQTFIQRWFENAEL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaccaatcccattacgaacctgcagaccctgatccgctgcgcctccgtcacc
cctgccgagggcggcgcgctgaccgtgcttgccggcatgctgcagccactcggcttcaag
atcgagcgcatgacggcgagcgagccaggaacgcccgatatcgaaaatctctatgcgcgg
ctcggcacggatggaccgcatctgatgtttgccggccatacggatgtcgtgccggtcggc
gatgccgcttcctggagccatccgccttttgctgccgaaatcgccgatggcgagcttttc
ggccgtggcgcggtcgacatgaaaggcggcattgcctgcttcgtggcagcggttgcgcgt
catatcgaaaagcatggcaaacccgccggctcgatctccttcctgatcaccggcgatgaa
gaggggccggcgatcaacggcacggtcaagctgctgcaatgggcggccgagcgtggcgag
acatgggatgcctcgctcgtcggcgaaccgaccaaccccgaccggctcggcgacatgatc
aagatcggccgccgcggctcgatttccggcactattacagtccatggcgttcagggccac
gccgcctatccgcaccttgccgacaatccggtgcgcagcatcatcaagctgacggaagcg
ctgctcgatccaccctttgacgcgggtacggacaattttcagccgtcgaacctcgaagtg
acgacgatcgacgtcggcaatgccgccaccaacgtcattcccgccaaggcaaccgctgcc
ttcaacatccgattcaacgacacctggactgccgatacgctgaaggcggaaatcctggca
cgcctggatgcagccgccgccgaccagacgctgcgacccgggcgtccgccggcgaaatac
gacatcgtctggtccgagcgtccgagccaggtcttcctgacgcgcaacaatgcgctgatc
gcctcgctctcctccgccatcgaaaacatcaccggtcaaaggccggcgctgtcgaccacc
ggcggcacgtccgacgcacgcttcatcaaggactactgccccgtcgtggaattcgggctt
gtcggccagaccatgcatatgatcgacgagcgtgtggcgctctcggatctcgaaacgctg
accgggatctaccagaccttcatccagcgctggttcgagaatgccgagctttaa
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