Rhizobium sp. 11515TR: CKA34_07405
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Entry
CKA34_07405 CDS
T06097
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CKA34_07405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
OB_RRP5_4th
HHH_5
HHH
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ASW05726
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Position
1519155..1521464
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AA seq
769 aa
AA seq
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MSADIRSLAATIAAEINSRPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRTLSE
RLVYLRELEARRAAIIESITSQGKMTDELMGKIAMVATKSELEDLYLPYKPKRRTRAEIA
RERGLGPLADTILADRSKEPTVLAEGFLTADVPDVKTALEGARDIIAEGIAENADLLGKL
RNYMKTNATLKAAVVDGKQEAGAKFSDYFAHQERWATAPGHRALAMLRGWNEEVLTLTIE
VDVDAVSPNKPVERMITAAYDIGASRPGDRWLTEVASWTWRVKLSMSLSLDLMRELRERA
EEEAIHVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAVVDGTGKLLETTTVYPFPPK
NDVRGTQATLAALIRKHKVELIAIGNGTGSRETEKLVADMLAELPAPKPTKVIVSEAGAS
VYSASETAALEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQQKLSR
SLDAVVEDAVNAVGVDLNTASAPLLSRVSGLGPSIADAIVKHRDVEGAFETRRDLLKVAR
LGQRTFEQCAGFLRIPNGKEPLDASSVHPEAYGVAKKIVAACGRDLRTLMGDTATLKAID
PRQFIDDKFGLPTVRDIIAELEKPGRDPRPSFKTATFAEGINEISDLKPGMLLEGTVTNV
AAFGAFVDIGVHQDGLVHVSQLADRFIKDPHEVVKAGDVVKVRVVEVDAKRKRIGLSMRK
DGSTVAAPSGRDTREQGGLRNAGVKGNTRPKAEQQGSFGAALADALKRK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgatatccgttcccttgctgctaccatcgccgccgagatcaactcccgcccg
gatcaggccaaggccgccatcgagctcttggacgaaggcgcgaccgtgcccttcattgcc
cgttaccgcaaggaggtgactggcggcctcgatgatacccagcttcgcactttgtcggaa
cgtctcgtctatctgcgtgagctggaagcccgccgtgccgccatcatcgaatccatcacc
agccagggcaagatgaccgacgagttgatgggcaagatcgccatggtcgcaaccaagtct
gagctggaagacctttatctgccctacaagccgaagcgccgcacgcgcgccgagattgcg
agagagcgtggcctcggccccctggccgacacgatccttgccgatcgctctaaggagccg
acggtgctggccgaaggtttcctcacggccgatgtgcctgatgtgaagacggcgctggaa
ggcgcgcgcgatatcatcgccgaaggcattgccgaaaatgccgatctgctcggcaagctg
cgcaactacatgaagaccaacgccacgctgaaggccgccgtcgtcgacggcaagcaggag
gcaggcgccaagttctcggactatttcgcccatcaggagcgttgggcgacagcgcccggt
catcgcgcgctcgccatgctgcgcggctggaacgaagaggtcctgacgctcactatcgaa
gtcgatgttgatgccgtctcaccgaacaagccggtcgagcgcatgatcaccgcggcgtat
gatatcggtgccagccggcccggcgatcgctggttgacggaggtcgcgagctggacatgg
cgcgtgaagctttcgatgtcactgtcgctcgacctgatgcgcgaactgcgcgaacgtgcc
gaagaagaagcgatccatgtcttcgcccgcaatttgaaggatctgctgctggcggctcct
gccggttcgcgcgccaccatgggcctcgatccgggcatccgcaccggcgtcaaggtcgcc
gtggtggacggcacgggcaagctcctggagacgacgacagtctatccgttcccaccgaag
aacgacgtacgcggcacgcaggcgacgctggccgcgctcatccgcaagcacaaggtcgag
ctgatcgcgatcggcaacggcactggcagccgcgaaaccgaaaagctggtggccgacatg
ctggccgaactgcccgctccgaagccgaccaaggtcatcgtttcggaagccggcgcatcg
gtctattccgcctcggaaacggcagcgcttgaattccccggtcttgacgtctcgctgcgc
ggcgctgtctccattgcccgccgcctgcaagatccgctggcggagctggtgaagatcgag
ccgaaatcgatcggcgtcggccaatatcagcacgatgtcgaccaacaaaagctgtcgcgt
tcgctggatgccgtggtcgaggatgcggtgaacgctgtcggggtcgatctgaacacggcc
tcggcgccgctgctttcccgtgtctcgggtcttggcccgtcgatcgccgatgccatcgtc
aagcatcgcgatgtcgaaggcgcgtttgagacgcggcgcgatctcctgaaagtcgcccgt
ctcggccagcgcaccttcgagcaatgcgccggcttcctgcgcatcccgaatggcaaagag
ccgctcgacgcgtcctcggtgcacccggaagcctatggtgtggcgaagaagatcgttgct
gcctgcggccgtgatctccgcacgctgatgggcgatacggcaacgctgaaggccatcgat
ccccggcaattcatcgacgacaaattcggcctgccgaccgtgcgtgacatcatcgccgag
ctggaaaagccgggccgagatccgcgtccgagcttcaagacagcgacctttgcggagggc
atcaacgagatcagcgacctcaaaccgggaatgctgctggagggaaccgtgaccaacgtc
gccgcctttggcgccttcgtcgatataggcgtccatcaggacggtttggtgcatgtctcg
cagctggcggaccgtttcatcaaggacccgcatgaggtcgtgaaggctggcgatgtcgtc
aaggtcagggtcgtggaagtcgatgcgaagcgtaagcgaatcggcctttccatgcgcaaa
gatggcagcactgtggcagccccgtcggggcgtgacacacgcgaacagggtggtttgcgc
aacgctggcgttaagggaaatacccgtccgaaggccgaacagcagggtagttttggggcc
gccttggccgatgcactcaaacgaaaataa
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