Rhizobium sp. 11515TR: CKA34_07890
Help
Entry
CKA34_07890 CDS
T06097
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhr03036
]
CKA34_07890 (smc)
Chromosome and associated proteins [BR:
rhr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CKA34_07890 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
ABC_tran
AAA_29
DUF4947
Motif
Other DBs
NCBI-ProteinID:
ASW05812
LinkDB
All DBs
Position
1615634..1619095
Genome browser
AA seq
1153 aa
AA seq
DB search
MKFNRLRLVGFKSFVEPAEFVIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG
MDDVIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDSDEIQVTRRIEREQGSVYRINGK
EARAKDVQLLFADASTGARSPSMVGQGRIGELIQAKPQARRQLLEEAAGISGLHSRRHEA
ELRLRAAESNLERLDDVTSQLESQIESLKRQARQANRFKMLSADIRAREAMLLHIRWVQA
KEAEAEADSALNQATVLVAEKAQVQMEAAKAQGIASFKLPELRDEEAKAAAALQRLQIAR
SQLEEDVNRILRRRDELIRRLAQLGEDINREQRLVADNAAILEKLDAEEADLADILADSG
RLAEETRIAFEEAAAKLADSERIFTVLTAERAEAAAARNQLERAIRDLADRKMRLERQAD
EANRELAAIDEKMADLPDPSEKRDMVEAAESVVADAESEIQRVEAVLAKARETEALSRGP
VEQARARLNALETEARTISKMLAAGDTSGAFSPVAEELRVDRGFETALGAALGDDLESSL
NSEAPVYWSDNGSGANDPALPEGAAPLITHVGAPAALTRRLRQIGIVSVEDALRLMPELK
PGQRLVTRDGAVFRWDGHVTGADAPSAAALRLAQKNRLSELEAEAELARDVLVEAEERLS
AAADAIRGEEGRLATARDASRLAARHLAEAREALAAAERASGDLIRRRDVIVEAVSRLQE
QLEDVVMQDENARIELEDAPNLDAIDLKLRDQQAEVATDRGVLAEARARHEGLNRENEAR
QRRIMAIRQERDTWRQRAASAEEHIQTLRDREEEAREEAAELDLAPDEFDDKRRALMNEL
QKAEDARRQAADRLAEAEGIQREADRHAATALSELAESREKRGRVEERLVSARERRQESE
LRIRQSLNVEPHEAMRLTGLSASQNVPDLREVERELERLKIERERLGAVNLRAEEESKEL
TERLQALIKERDDVIDAIRKLRGAIQSLNREGRERLIVAFDIVNAQFQRLFTHLFGGGTA
ELQLIESDDPLEAGLEILARPPGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVLD
EVDAPLDDHNVERYCNLMDEMAASTETRFVVITHNPITMARMDRLFGVTMAEQGVSQLVS
VDLQTAERLREIA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaatagactgaggcttgtcggcttcaaatccttcgtcgaaccggcggaattc
gttatcgagcgcggcttgaccggtgtcgtcggcccgaatggctgcggcaagtccaatctt
gtcgaagccctgcgctgggtgatgggcgagaattcctacaagaacatgcgcgcctccggc
atggacgacgtgatcttctccggatccggcaatcgcccggcccgcaacaccgccgaagtc
ggcctctacctcgacaatagcgatcgcactgcgcccgccgctttcaacgacagcgatgaa
atccaggtgacgcgccgcatcgaacgcgagcagggctcggtctatcgtatcaacggcaag
gaagcgcgcgccaaggatgtgcagctgctgttcgccgacgcttctaccggtgcccgttcg
ccttccatggtcgggcaggggcgtatcggcgagctgatccaggcaaagccccaggcgaga
cgccagctgctcgaagaagcggcgggcatttctggcctgcactcgcgccgccatgaagcc
gagctgcgccttcgtgccgccgaaagcaatctcgagcggcttgacgatgtaacgtcgcag
ctcgaaagccagatcgagagcctgaagcgccaggcgcggcaggccaaccgcttcaagatg
ctctccgccgatatccgcgcccgcgaggcgatgctgttgcatatccgctgggtgcaggcc
aaggaagccgaagccgaggccgatagcgcgctgaaccaggcaaccgtgcttgtcgccgaa
aaggcgcaggtccagatggaagcggcaaaggcacagggcatcgccagtttcaagctgccg
gaactgcgcgacgaagaggcgaaagccgccgccgctttgcagcgtctgcagattgcccgt
tcgcagctggaggaggatgtcaatcgtatcctgcggcggcgggatgagttgatccgtcgt
ctggcgcagctcggagaggatatcaaccgcgagcagcgcctcgtcgccgacaatgccgct
attttggaaaagctcgacgcagaagaagccgatctcgccgatattcttgccgattccggt
aggcttgcggaagagacgcgtatcgccttcgaggaggccgccgccaagctcgctgacagc
gagcggatatttactgttctgaccgcagaacgcgccgaagctgccgctgcccgtaatcaa
ctggagcgcgccatccgcgatctggccgatcgcaagatgcggctcgagcgacaggccgat
gaagcgaaccgcgagcttgccgccattgacgagaagatggccgatctgcccgacccgagt
gaaaagcgcgacatggtcgaggcggcggaaagtgtcgttgcggatgcggaaagcgagatc
cagcgcgtcgaagccgttcttgccaaggcgcgtgaaaccgaggcgctgtcgcgtggtccg
gtcgagcaggcgcgggcgcgtctgaatgcgctggaaaccgaggcgcggaccatttccaag
atgttggcggcgggcgacacgtccggtgccttttcgcctgttgccgaagagctgcgtgtc
gaccgtggcttcgaaacggcgcttggcgctgcacttggcgatgatctggaatcctcgctc
aattccgaggcaccggtctattggtcggacaatggcagcggtgccaacgacccggccttg
ccggaaggcgccgcgccgctgattacccatgtcggcgcgccggcggcactgacgcgccgt
ctacgccagatcggcattgtctcggtggaagatgcgctgcggctgatgcccgagctgaag
ccgggacagcggctggtgaccagggatggcgccgtgttccgctgggatggtcacgtgacc
ggagcggatgcgccgagtgcggctgccctgcggctcgcccagaagaaccgcctctccgag
ctggaggctgaagccgagctcgcccgtgatgtgcttgtcgaggccgaggagcgcctctct
gccgccgccgatgcgatccggggcgaagaaggccgtttggccaccgcccgtgacgcaagc
cgccttgcagcccgtcatctggccgaggcgcgcgaagcgctagctgcggcggaacgggct
tccggcgatcttatccgccgccgcgacgtcatcgtcgaggccgtcagtcggctgcaggag
cagctggaagacgttgtcatgcaggatgagaacgcccgcatcgaactggaagatgcgccg
aatctcgacgccatcgatctgaagctgcgcgaccagcaggctgaagtcgcgacggatcgc
ggtgtgctggccgaagcacgcgcccgccatgagggcctgaaccgcgaaaacgaggcgcgg
caacgtcgtatcatggcgatccgccaggagcgcgacacctggcgtcagcgcgcagccagc
gccgaggagcacattcagacgctgcgcgaccgtgaagaggaagcgcgcgaggaggcggcc
gagctcgatttggcacccgatgagttcgacgacaagcgccgcgccttgatgaacgagttg
cagaaggccgaggatgctcgccgccaggccgccgatcgccttgccgaagctgaaggcatc
cagcgcgaagccgatcgccatgcggcgacggcactctccgagcttgccgaaagccgggaa
aagcgcggccgcgtcgaggagcggctggtgtcggcgcgtgagcgtcggcaggaaagcgaa
ttgcgcatccgccagtccctgaatgtcgagccgcatgaggccatgcgcctgaccggcctt
tcagcatcgcaaaacgtgcctgatctgcgcgaggtcgagcgcgagctggagcgcctgaag
atcgaacgtgagcgtctcggtgccgtcaatctgcgcgccgaggaggaaagcaaggagctg
acggagcggctgcaagcgctgatcaaggagcgcgatgacgtcatcgacgccatccggaag
ctgcgcggcgcgatccagagcctcaaccgcgagggtcgcgaacgcctcatcgtcgccttc
gacatcgtcaatgcgcagttccagcggctgttcacccatcttttcggtggcggcacggcg
gaactgcagctcatcgagtcggatgatccgctggaggcaggcctcgaaattctcgcccgc
ccgccgggcaaaaagccgcagaccatgacgctgctttccggcggcgagcaggcgctgacg
gccatggcactgatctttgcggtgttcctcaccaatcccgcgccgatctgcgtcctggac
gaagtggatgcgccgctcgacgaccacaatgtcgagcgctactgcaacctcatggacgag
atggcggcctctactgagactcgcttcgtagtcatcacgcacaatcccatcaccatggcc
cgcatggatcgcctcttcggcgtcaccatggcggagcagggcgtctcgcaactcgtttcc
gtcgatctgcaaaccgccgaacggctgcgcgaaatcgcttga
DBGET
integrated database retrieval system
