Rhizobium sp. 11515TR: CKA34_08260
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Entry
CKA34_08260 CDS
T06097
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_08260
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CKA34_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
T2SSE
AAA_10
AAA_16
TrwB_AAD_bind
Hydrolase
DUF5852
AAA_7
AAA_19
nSTAND3
Hydrolase_6
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ASW05878
LinkDB
All DBs
Position
complement(1691635..1693146)
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AA seq
503 aa
AA seq
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MPQQDGQIFVGASRNPDDSINKDEFLTLKFGNRHGLVTGATGTGKTVTLQVLAEGFSKAG
VPVFCADIKGDLSGIAAKGEPKDFLLKRAEEIGLSPYEFDQFPVIFWDLYGEKGHRVRTT
IAEMGPLLLARLMDASEAQEGVLNIAFKIADENGLALLDLKDLQALLNYMGENASELSTK
YGLISKSSVGSIQRAMLVLEQQGAENFFGEPALKISDIMRVSNDGYGQISVLAADKLMMN
PRLYATFLLWLLSELFEELPEVGDPEKPKLVFFFDEAHLLFNDAPKVLIERVEQVVRLIR
SKGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVQTAASTFRPNPAFDCAT
VITTLGTGEALVSMLEGKGTPSVVERTLIRPPSGRIGPVTDGERQAIINGSPVAGVYDQT
IDRESAYEILTERARKAAAPQNESAGDGWTLPGFGGDSSKPAGHRSGYQRETILEATMKS
MARTVATQVGRALVRGILGSLKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagcaagatggacagattttcgtcggcgcgagccgcaatccggatgacagcatc
aataaggacgagttcctgacgctgaaattcggcaatcgccacggcctcgtcacgggcgcc
actggcaccggcaagacggtgacgctgcaggtgctggcggagggattttccaaggccggc
gtgcccgtcttctgtgccgacatcaagggcgatctttcgggcatcgccgccaagggcgag
ccaaaggacttcctgctgaagcgcgccgaggaaatcggcctgtcgccctatgagttcgac
cagttcccggtgatcttctgggacctctatggcgaaaaaggccatcgggtgcgcaccacc
atcgccgaaatgggcccgctactgctggcccgcttgatggatgcgtccgaggcacaggag
ggcgtgctcaacatcgccttcaagatcgccgatgaaaatggcctggcgctgctcgacctc
aaagacctgcaggcgctgctgaactatatgggcgaaaatgccagcgagctctccacgaaa
tatggcctgatctcgaaatcgtcggttggctcgatccagcgcgccatgcttgttctggaa
cagcagggcgcggaaaacttcttcggcgagccggcgctgaagatttccgacatcatgcgg
gtcagcaacgatggctacgggcagatctcggtgcttgcagctgacaagctgatgatgaac
ccgcgcctctatgccaccttcttgctatggctgctctccgagctgttcgaggaactgccc
gaagtcggcgatccggaaaaacccaagctggtcttcttcttcgatgaagcgcacctgctc
ttcaacgacgcgccgaaggtgctgatcgaacgcgtggagcaagtggtgcgactgatccgc
tccaagggcgtgggcgtctatttcgtgacgcagaacccgctcgacgtgccggaaacggtg
ctggcacagcttggcaatcgcgtgcagcatgcgcttcgcgcctatacgccgcgcgagcag
aaggccgtgcagacggcggcctcgaccttccggcccaatccggccttcgattgcgccacc
gtcatcacaactctcggtaccggagaggcgctcgtgtcgatgctggagggcaagggtacg
ccgtccgttgtcgagcgcacgctgatccgcccgccatccggccgtatcggacccgtcacc
gatggcgagcgtcaagccatcatcaacggcagtccggttgcaggcgtctatgaccagacg
atcgaccgcgaatccgcctatgagatcctgacggagcgggcacgcaaggcggccgcgccg
cagaacgagagtgccggcgatggctggaccttgccgggcttcggtggtgatagcagtaag
ccagccggtcaccgttcgggctatcagcgcgagacgatcctggaggcgacgatgaaaagc
atggcacgcacggtggcaacgcaagtcgggcgggcgctggtgcgtggtattctcggcagc
ctaaagcggtag
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