Rhizobium sp. 11515TR: CKA34_09480
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Entry
CKA34_09480 CDS
T06097
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhr03016
]
CKA34_09480 (rnd)
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CKA34_09480 (rnd)
Transfer RNA biogenesis [BR:
rhr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKA34_09480 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
ASW06092
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All DBs
Position
complement(1939049..1940194)
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AA seq
381 aa
AA seq
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MIETTAQLEAACQELAKSEFITIDTEFLRETTFWPELCLIQMASPTTEVLVDPLAKGLDL
APFFELMANPSVLKVFHAARQDIEIIFHRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSEKQLDYALADVTHLRDVYLSLKEQLKREGRASWLQEEM
AILEARETYDLHPDDAWQRLKMRLRKPQELAVLKFVAAWREREARARNVPRARVLKDDAI
YEIAQQQPKDSEALARLRTIPKGWERSAAGTAVLEAINAALALPKAEMPHPPRHQQAPEG
TAAASELLKVLLKLIAEKHGVAPKVIANSDDLDKIAAEGEKADVAALTGWRRDLFGETAL
QLIQGQVALRFVGKRIETVAL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaactaccgcccaattggaggcggcctgccaagagctggccaagtcggaattc
attaccatcgatacggaattcctgcgagaaacgaccttctggccggaactgtgtttgata
cagatggcaagccccaccacggaagtgctggtggacccgctagccaaggggctggatctg
gcacccttcttcgaactgatggccaacccgtcggttttgaaggtgtttcatgctgcgcgc
caggatatcgaaatcattttccatcgcggcaatctcattccgcatccgatcttcgatacg
caagttgcggcgatggtctgcggcttcggcgattcggtttcctacgatcagctcgtcagc
cgcatcaagaatgtccatatcgacaaatcctcgcgttttaccgactggagccggcgcccg
ctctcggaaaagcagctggactacgcgctcgctgacgtgacccatctgcgcgacgtctat
ctctcactcaaggaacagctcaagcgcgagggccgtgcctcctggctgcaggaggagatg
gcgatcctcgaagcgcgcgagacctatgacctgcatcccgacgatgcctggcagcggctg
aagatgcggctgcgcaaaccccaggaactggccgtcctcaaattcgtggccgcctggcgc
gaacgcgaggctcgcgcacgcaacgtcccacgcgcccgcgtgctgaaggacgatgcgatc
tatgaaatcgcgcagcagcagccgaaggatagcgaagcgctggcgcgtctgcgcaccatt
ccgaagggttgggaacgctcggcagcaggaaccgcggtgcttgaagcgatcaacgcggcg
ctggcactaccgaaggcagaaatgccgcatccgccgcgccatcagcaggcccccgagggc
acggcagcggcttccgaactgttgaaggtccttttgaagctgattgccgaaaagcatggc
gtcgccccgaaggtcatcgccaacagcgacgatctcgacaagatcgccgccgagggcgag
aaggccgatgtcgccgctctgactggctggcgtcgagatcttttcggcgaaactgccctg
cagctgatccagggtcaggtggccctgcgcttcgtcggcaagcggatcgagaccgtcgcc
ctctaa
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