Rhizobium sp. 11515TR: CKA34_09565
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Entry
CKA34_09565 CDS
T06097
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhr01002
]
CKA34_09565
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhr01011
]
CKA34_09565
Peptidases and inhibitors [BR:
rhr01002
]
Cysteine peptidases
Family C82
CKA34_09565
Peptidoglycan biosynthesis and degradation proteins [BR:
rhr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CKA34_09565
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Mu-transpos_C_2
Motif
Other DBs
NCBI-ProteinID:
ASW06106
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Position
1957679..1958992
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AA seq
437 aa
AA seq
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MSKKNGIGPFSRRAFLRSAATLGAAALAAPALAQNATPLEALINDRSRGNWDDQFDAKAA
ARTAAAVQSNTPILGPDSVSNIQQAIAQYQSIAANGGWPQINPTSQQPLQLGVTDPAVQS
LRQHLMITGDLPREAGISSAFDSYVDGAVKRFQARHGLPADGVLGDFTLKAMNIPANVRL
QQLNTNLVRLQTFPSDLGRRHVMVNIPATRVEAVEDGQVALRHQAIVGRESRPTHIINSK
IYEVILNPYWTAPRSIIIKDIVPLMRKDPTYLTKNNIRLLDGKGQEVAPETIDWNSDKAP
DLMFRQDPGKTNAMASTKINFYNPNNEYMHDTPEQGLFNKLMRFDSSGCVRVQNVRDLAT
WLLAETPGWPRQHIEQVISTRVNTPIKLATEVPVYFVYISAWSARDGIVQFRDDIYNLDG
NSQLALNTTQGMEQPVQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattggacccttttcgcgccgcgctttcctgcggtcggctgca
actcttggcgctgccgcactggctgctccggctctcgcgcaaaacgcgaccccactggaa
gcgctgatcaacgaccgttctcgcggcaattgggatgatcagttcgacgccaaggccgcg
gcgcgcaccgccgctgctgttcagtcgaacacgccaatcctcgggccagattccgtatcg
aatattcagcaggcgatcgcgcaatatcagagcattgccgccaacggcggatggccgcag
atcaatccgacaagccagcagccgctgcagcttggcgtgactgatccggccgtacagtcg
ctgcgccagcatttgatgatcaccggtgacttgccgcgtgaggctggtatctcttccgcc
ttcgactcctacgtcgacggtgcggtcaagcgtttccaggcccgtcacggactgccggca
gatggcgtcctaggcgatttcacgctgaaggcgatgaacatccccgccaatgttcgcctg
cagcagctcaacaccaatcttgttcgcctccagacattcccgtccgacctcggccgccgt
cacgtcatggtcaacatcccggcgacacgtgtcgaagccgtagaggatggtcaggttgca
ctgcgccaccaggcgatcgtcggccgtgaatcgcggcctacgcacatcatcaattcgaag
atctatgaggtcatcctcaacccatactggacggcgccgcgctccatcatcatcaaggac
atcgtgcccttgatgcgcaaggacccgacctacctgacgaagaacaacatccgtcttctc
gacggcaagggccaggaagtcgcacccgagacgatcgactggaactcggacaaggccccg
gacttgatgttccgtcaggacccgggcaagacgaacgccatggcgtccacgaagatcaac
ttttataatcccaacaacgaatatatgcacgacacgccggagcagggcctgttcaacaag
ctcatgcgtttcgacagctcgggctgcgtgcgcgtccagaacgtgcgcgacctcgcgacc
tggttgctggctgaaacgccgggctggccgcgtcagcacatcgagcaggtcatctccacc
cgcgtcaacacgccgatcaagctggcgaccgaagtgcccgtctatttcgtttatatttcg
gcctggagcgcccgcgacggcatcgtccagttccgcgacgacatctacaatctcgacggc
aattcccaattggcgctcaacacgacccagggcatggagcagccggttcagtaa
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