Rhizobium sp. 11515TR: CKA34_09570
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Entry
CKA34_09570 CDS
T06097
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00260
Glycine, serine and threonine metabolism
rhr00460
Cyanoamino acid metabolism
rhr00630
Glyoxylate and dicarboxylate metabolism
rhr00670
One carbon pool by folate
rhr00680
Methane metabolism
rhr01100
Metabolic pathways
rhr01110
Biosynthesis of secondary metabolites
rhr01120
Microbial metabolism in diverse environments
rhr01200
Carbon metabolism
rhr01230
Biosynthesis of amino acids
rhr01240
Biosynthesis of cofactors
rhr04981
Folate transport and metabolism
Module
rhr_M00140
C1-unit interconversion, prokaryotes
rhr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CKA34_09570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CKA34_09570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CKA34_09570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CKA34_09570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CKA34_09570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CKA34_09570 (glyA)
Enzymes [BR:
rhr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CKA34_09570 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ASW06107
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Position
1959170..1960468
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AA seq
432 aa
AA seq
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MTNASTEPFFNRSLADTDPEIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQYVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVQRKAEEHKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRG
PRGGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVALGEALQPDFKDYAAQIVKNA
KALAETLISGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGTPAGTTRGFKEAEFREIGNLIIEVLDGLKVANSDEGNAAVEAAVREKVVK
LTDRFPMYGYMG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcgtccaccgaacccttcttcaatcgctcgcttgccgataccgatccggaa
atctttggcgcgatcggcaaggagctcggtcgtcagcggcacgaaatcgaactgatcgct
tcggaaaacatcgtctcgcgcgccgttctggaagcgcagggctcgatcatgaccaacaaa
tatgccgagggatatccgggcaagcgctactacggcggctgccagtacgtcgatatcgcc
gaggagctcgccatcgagcgcgccaagaagctgttcggcgtcaacttcgccaacgtccag
ccgaattccggttcgcagatgaaccaggccgtctttctggcgctcttgcagccgggcgac
accttcatgggcctcgatctgaattcgggcggccacctgacgcacggatcgccggtcaac
atgtccggcaaatggtttaacgtcgtgtcctacggcgtgcgcgaaggcgataacctgctc
gatatggatgaagtgcagcgtaaggccgaagagcacaagccgaagctcatcattgccggc
ggtacggcttattcccgcatctgggactggaagcgctttcgcgagatcgccgacagcgtc
ggcgcctatctgatggtcgatatggcccatatcgctggtctggttgccggtggtcagcat
ccgtcgccgttcccgcattgccacgttgctaccacgaccacgcataagtcgcttcgcggc
ccgcgcggcggcatgatcctcaccaatgacgaggatctggcgaagaagttcaactcggcc
gtcttcccgggtctccagggcggcccgctcatgcacgtcattgccgcaaaagccgttgcc
ctcggcgaagcgctgcagcccgatttcaaggactacgccgcccagatcgtcaagaacgcc
aaggctctcgccgaaacgctgatctccggcggcgtcgatgtcgtctccggcggcaccgac
aaccatctgatgctggtcgatctgcgcaagaagaacgccaccggcaagcgcgcggaagct
gccctgggccgtgcctacgtcacctgcaataagaacggcattcccttcgaccctgagaag
cctttcgtaacctcgggtgtccgcctcggcacgccggccggcacgacgcgcggcttcaag
gaagccgagttccgggagatcggcaatctgatcatcgaagtgctcgatggcctgaaggtc
gccaattccgacgaaggcaatgctgccgtcgaggctgccgtgcgcgagaaggtggtcaag
ctcactgaccgcttcccgatgtacggctacatgggctaa
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