Rhizobium sp. 11515TR: CKA34_11070
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Entry
CKA34_11070 CDS
T06097
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKA34_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhr03021
]
CKA34_11070
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_11070
Enzymes [BR:
rhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKA34_11070
Transcription machinery [BR:
rhr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKA34_11070
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKA34_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
ASW06375
LinkDB
All DBs
Position
2227002..2228012
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLSMSIETDGSISGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaactgatcaagcccaacaaggtcgagttcacctcgagc
ggccgtacgaaggcaacgctcgtggccgaaccgctggagcgtggctttggtctcaccctc
ggcaacgcgctgcgtcgcgttctgctgtcctctctgcgcggtgccgctgtaacggccgtg
cagatcgacggcgtattgcatgagttctcctctatcccgggcgtccgggaagacgtgacg
gacatcgtgctgaacatcaaggaaatcgccatcaagatggacggcgatgacagcaagcgc
atggtcgtccgcaagcagggcccaggtgtcgtaactgctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgttatctgcacgctcgacgagggcgccgaaatc
cgcatggaattcaccgtcaacaatggcaagggctatgtgcctgccgaacgcaatcgtgcg
gaagacgctccgatcggcctcatcccggtcgatagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgagcatg
tcgatcgaaaccgacggttcgatcagcggtgaagatgccgtcgctttcgcggctcgcatc
ctccaggatcagcttggcgtgttcgtcaacttcgacgagccgcagaaggaagccgaagaa
gaagcagtcaccgaactcgctttcaacccggcgctcctcaagaaggtggacgagctggaa
ctgtccgttcgctcggcaaattgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagaccaatactaa
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