Rhizobium sp. 11515TR: CKA34_11590
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Entry
CKA34_11590 CDS
T06097
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKA34_11590 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_11590 (xth)
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CKA34_11590 (xth)
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CKA34_11590 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ASW06463
LinkDB
All DBs
Position
complement(2334989..2335780)
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AA seq
263 aa
AA seq
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MKIATWNINGVKARIENLCQWLKDSNPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK
GFNGVAILSKTKPDEVTRGLPGDDSDEQARFIEAVFSVEGHGALRICCLYLPNGNPVDTE
KYPYKLAWMERLRKFALDRLALEEPLILAGDYNVIPEPHDCFDPKVWESDALFLPQTRQS
FRQLEHLGFTDAVRATTDAIKLYSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTATAIE
KHVRAWEKPSDHVPVIAHLDFGG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacctggaacatcaacggcgtcaaagcgcgtatcgagaacctctgccaa
tggctgaaggattcgaacccggacatcgtctgcctgcaggaaatcaaaacggtcgacgaa
ggctttccacgtttggagatcgaagcgctcggctatcacgtcgagacgcatgggcagaaa
ggcttcaatggcgttgcgattctttcgaagacgaaaccggatgaggtgacgcgcggttta
cccggcgacgacagcgacgaacaggcccgcttcatcgaggccgtgttctccgtcgaagga
cacggcgccctgcggatctgctgcctttatctgccgaacggcaatccggtcgataccgaa
aaatacccgtacaagctcgcctggatggagcgcctgcgcaaattcgccttggatcgcctg
gccttggaggagcctctgatactcgccggcgactacaacgtcattccggagccacatgat
tgtttcgacccgaaggtctgggagagcgacgccctcttcctgccgcagacgcgccagtcc
ttccgtcagctcgaacatctcggctttaccgatgcggtacgcgcgacgacagatgcaatc
aagctttattcattctgggattatcaggccggcgcatggccgaagaacaacggcatccgc
atcgaccatctgatgctgtcgcccgaggctgccgatcgcctcactgcaacggcaatcgag
aagcatgtgcgcgcctgggaaaaaccgtcggaccacgtgcctgtcatcgcgcatcttgat
ttcgggggctaa
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