Rhizobium sp. 11515TR: CKA34_12025
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Entry
CKA34_12025 CDS
T06097
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00541
Biosynthesis of various nucleotide sugars
rhr01100
Metabolic pathways
rhr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CKA34_12025
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhr01005
]
CKA34_12025
Enzymes [BR:
rhr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CKA34_12025
Lipopolysaccharide biosynthesis proteins [BR:
rhr01005
]
Lipid A
CKA34_12025
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASW06538
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Position
2422178..2423017
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AA seq
279 aa
AA seq
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MSTNSEVTVGEGASKVLFSNTAKLSLIAGPCQMESRDHAFMIAGVLKELCGKLGIGLVYK
SSFDKANRTSLSGKRGIGLEKALEVFEDLKKEYGFPVLTDIHTEEQCAIVSKTVDVLQIP
AFLSRQTDLLVAAAKTGRVVNVKKGQFLAPWDMKNVLAKLNDSGNPNILLCERGASFGYN
TLVSDMRSLPIMAAMGAPVIFDATHSVQQPGGQGGSSGGDRRFVETLARAAVAVGVAGVF
VETHEDPDNAPSDGPNMVYLKDMPRLLEKLLAFDAIAKA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaattccgaagtcaccgtcggcgagggtgcctccaaggttctcttttccaat
accgcgaagctgtcgctgatcgccggtccctgccagatggaaagccgcgatcatgccttc
atgattgccggcgtgctcaaggagctctgcggcaagctcggcatcggccttgtctacaaa
tcttccttcgacaaggcgaaccgcacctcgctgtccggcaagcgcggcatcggcctggaa
aaggcgctggaagtctttgaagacctgaagaaggaatatggcttcccggttctgaccgat
atccacactgaagagcagtgtgccatcgtttccaagacggtggatgtccttcagatccca
gccttcctgtcgcgccagaccgatcttttggttgccgctgccaagactggccgcgtggtc
aacgtcaagaaaggccagttccttgcgccatgggacatgaagaacgtgcttgccaagcta
aacgacagcggcaatccgaacatccttctttgcgagcgcggcgcttccttcggctataac
acgctggtctcggatatgcgctcgctgccgatcatggcggcgatgggcgcccccgtcatc
ttcgatgcgacccattccgtgcagcagcccggcggacagggcggctccagtggcggcgat
cgccgcttcgtcgagacgctggcgcgcgctgccgtcgccgtcggcgtcgcaggtgttttt
gtcgagacgcacgaggatccggacaatgcaccgtccgacggtccgaacatggtctatctg
aaagacatgccgcggcttctcgagaagctgctggccttcgacgccatcgccaaggcttga
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