Rhizobium sp. 11515TR: CKA34_12565
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Entry
CKA34_12565 CDS
T06097
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03030
DNA replication
rhr03430
Mismatch repair
rhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKA34_12565
03430 Mismatch repair
CKA34_12565
03440 Homologous recombination
CKA34_12565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhr03032
]
CKA34_12565
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_12565
Enzymes [BR:
rhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKA34_12565
DNA replication proteins [BR:
rhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKA34_12565
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKA34_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
RuvB_N
AAA_16
AAA_22
Mg_chelatase
nSTAND3
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ASW06634
LinkDB
All DBs
Position
complement(2535137..2536168)
Genome browser
AA seq
343 aa
AA seq
DB search
MSDERPGVLDGAIPPQDNTKLFGHEEAEIFLAQSYRSGKGHHAMLIEGPEGIGKATLAFR
FANHVLSHPDPASAPERIGDPDPASVVSRQISGGASHNLLHLSRPVDDKTGKVKSAITVD
EVRRAGKFFSQTSGTGNWRIVIIDPADDLNRSAANAILKILEEPPKRALFLVLSHAPGRL
LPTIRSRCLPLKLAPLGNDALRMALENLGVPTGQGSELLSAAKGSVSEALKLLNYGGGEI
IEAYRQVLSADGPAARKAMHRLADALSGKDSDTIFGFFLSHIGDDIIDRARAAALGGAIA
TAERLARLHSETTERLNVSQAYNLDRKQTLITILGELKQQLSA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacggccgggtgtcctcgacggcgccattcctccgcaggacaatacgaag
ctcttcggccatgaagaggcggaaattttcctcgcgcaatcctatcgctccggcaagggc
caccacgccatgctgatcgaagggcctgagggcatcggcaaggcgacgctcgccttccgt
ttcgccaatcacgtcctctcccatcccgatccggcatccgcgccggagaggatcggcgat
cccgatccggcatcggtcgtcagccggcagatttccggcggagcatcgcataatctgctg
catttgagccggccggtcgacgacaagaccggcaaggtgaaatccgcgatcaccgtcgac
gaagtgcgtcgcgccggaaaattcttttcgcagacctcgggcaccggcaactggcgcatc
gtcatcatcgatcccgccgacgatctcaaccgcagtgcggccaatgccatcctgaaaatc
ctcgaggaaccgccgaagcgcgctttgttcctcgtattgtcgcatgcgccgggccggctt
ctgccaacgatccgctcacgttgcctgcctttgaaacttgcgccgctcggcaatgatgcc
ttgcgcatggcgctcgaaaatcttggcgtgccgaccgggcagggaagtgaattgctctcc
gctgccaagggaagcgtcagcgaggcgctcaagctcctgaactacggcggcggcgagatc
atcgaggcctatcggcaggtgctttcggctgatgggcctgctgctcgcaaggcgatgcac
cgcctcgccgacgcactttccggcaaggatagcgacacgatctttggcttcttcctgtcg
catatcggcgacgacatcatcgaccgggctcgcgctgccgctcttggcggcgccattgcc
acggccgagaggctggcccggctgcattcggagaccactgagcgattgaacgtgtcccag
gcgtacaatcttgaccgcaagcagacgctcatcaccattctcggcgagctcaagcagcag
ctttcggcatag
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