Rhizobium sp. 11515TR: CKA34_12995
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Entry
CKA34_12995 CDS
T06097
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhr03009
]
CKA34_12995
Enzymes [BR:
rhr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CKA34_12995
Ribosome biogenesis [BR:
rhr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKA34_12995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASW06712
LinkDB
All DBs
Position
complement(2614415..2615413)
Genome browser
AA seq
332 aa
AA seq
DB search
MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGQLQKLLRSGQVRVNGGRVKTDARVQPGQ
MVRVPPLDVDAKGPKHGPIASNDLKHSGDAELLARMLLHEDDKVYVLNKPAGLAVQGGSG
LTRHIDKMLEAWTSKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYW
SLVKGVPRKHEDKISTWLVKEATPDGDRMRIAKHGEEGADHAISYYRVLETAAQSLAWLE
MEPYTGRTHQLRVHALHMGHPIIGDPKYFDDDPNWDFPGGVQKRLHLHARHIDIPHPSGG
RLRVTAPLPPHMVQTWNLLGFDMESAGEPDDE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccgggattgagcatattaaggtcgagcctgacgaggccggcatgcgcttggaccgc
tggttcaaggtgcattttccagggctcggctttggtcagctgcagaagctgctgcgctcg
ggccaggtgcgtgtcaatggtggccgcgtgaagacggatgcgcgtgtgcagccgggccag
atggtgcgcgtgccgccgctcgacgtcgatgccaaggggccgaaacatgggcctattgcc
agcaatgacctgaaacactccggcgacgccgagcttcttgcgcgcatgctgctgcatgaa
gacgacaaggtctatgtgctgaacaagccggcaggcctcgcggtgcagggcggctccggc
ttgacccgtcatatcgacaagatgctcgaggcatggacgagcaagaagggcgagaagcca
cgcctggtgcaccgtctcgaccgcgacacctcgggcgtgctcgtcgttgcccgcacccgc
ggtgccgcgcagaagttgacggcagcctttcgcgagcgcgacaccaagaagacttattgg
tcgctggtcaagggcgtgccgcgcaagcacgaggacaagatctccacctggctggtgaag
gaagcgacgccggatggcgaccgcatgcgcatcgccaaacatggagaggagggcgccgat
cacgccatctcctactatcgcgtgctcgagaccgcagcgcagagcctcgcctggctggaa
atggagccctataccggccgtactcaccagttgcgtgttcatgcactgcatatgggccat
ccgatcatcggcgaccccaaatatttcgatgacgatccgaactgggattttccgggtggc
gtccagaagcgcctgcatctgcatgcgcgccatatcgatatcccgcatcctagcggcggg
cgcctgcgggtcactgcgcctttgccgccgcacatggtgcagacttggaaccttctcggc
ttcgatatggaatcggcaggggagccggacgacgaatga
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