Rhizobium sp. 11515TR: CKA34_13015
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Entry
CKA34_13015 CDS
T06097
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00260
Glycine, serine and threonine metabolism
rhr00630
Glyoxylate and dicarboxylate metabolism
rhr00670
One carbon pool by folate
rhr00785
Lipoic acid metabolism
rhr01100
Metabolic pathways
rhr01110
Biosynthesis of secondary metabolites
rhr01200
Carbon metabolism
Module
rhr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CKA34_13015 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CKA34_13015 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CKA34_13015 (gcvP)
00670 One carbon pool by folate
CKA34_13015 (gcvP)
Enzymes [BR:
rhr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CKA34_13015 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-ProteinID:
ASW06716
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Position
2618060..2620924
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AA seq
954 aa
AA seq
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MTTPTEFTFTDYQPYDFANRRHIGPSPSEMADMLKVIGYKSLDGLIDATLPPAIRQKAPL
AWGAPMTEREALDRLRETANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMISDLTGLDVANASLLDEATAAAEGMAMAERVAKSKARAFFVDA
ECHPQTIALIRTRAEPLGWTVIVGNPVTDLDPVDVFGAIFQYPGTHGHINDFSGLIARLH
QTGAIAIMATDLLALTLLKSPGEMGADIAIGSSQRFGVPVGYGGPHAAFMAVKDDYKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPQGL
KAIAQQVHQKAVLMAKGLEKLGYTVEPETFFDTITVEVGHMQALILRAAVAEGVNLRKVG
ETKIGISLDERTRPATVEAVWRAFGGDFRIADFEPSYRLPRTLLRTSEYLSHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPADQALG
YREMIDDLTEKLCAVTGYDTFSMQPNSGAQGEYAGLLTIRNYHIANGQGHRDICLIPTSA
HGTNPASAQMAGMKVVVVKVSDDGDIDMADFRAKTEQYADNLSCCMITYPSTHGVFEETV
KEICDLVHKHGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPHLPGHPETDGRSGAVSAAAFGSASILPIPWSYCLMMGGEGLTQATKVAILNA
NYIAARLKGAYDVLYKSKDGRVAHECIIDTRPLAASAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCEAMLAIREEARAIEDGRMDKTNNPLKNAPHTVEDLVG
EWDRPYSREQACFPPGAFRVDKYWSPVNRIDNVYGDRNLICTCPPLESYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcctacggaattcaccttcaccgattaccaaccatacgacttcgccaaccgc
cgccatatcggcccgtctccgtcggagatggccgatatgctcaaggtgatcggctataag
agcctcgacggcctgatcgacgcgacgctgccaccggccattcgtcagaaggcaccgctc
gcctggggagcgccaatgacggagcgcgaggcgctcgaccgtctgcgcgagaccgccaac
aagaacaaggttctcgtttcgctcatcggccaaggctattacggcacgatcacgccgccc
gtcatccagcgcaacatcttggaaaatccggcctggtacaccgcctatacgccataccag
cctgagatcagccagggccgcctcgaggcactgctgaactaccagactatgatcagcgac
ctcacgggtctcgatgtcgcgaacgcctcgctgctcgatgaagcgaccgccgcggccgaa
ggcatggcgatggcggaacgtgtcgcaaaatcgaaggcaagggccttcttcgtcgatgcc
gaatgccacccacagaccatagcgctgatcaggacccgcgccgagccgctcggctggacc
gtcatcgtcggcaatcccgtcactgatctcgatccggtcgacgtcttcggcgcgatcttc
cagtatccaggcactcacggccatatcaacgattttagcggcctgatcgcccgcctgcat
cagaccggcgcaatcgccatcatggcgaccgatctcctggcattgaccctgctgaaatcc
ccgggtgaaatgggtgcggatatcgccatcggttcctcgcagcgcttcggcgttccggtt
ggctatggcgggccgcatgccgcgtttatggccgtcaaggacgactacaagcgctccatg
cccggtcgtcttgtcggcgtctcggtcgatgcgcgcggcaatcgcgcctatcgcctctcg
ctgcagacccgcgagcagcatattcgccgcgaaaaggcgacgtcgaacatctgcactgcc
caggtgctgctcgccgtcatggcctccatgtatgcggtcttccacggtccgcagggcttg
aaggccatcgcccaacaggtccaccagaaggccgtgctgatggccaagggcctggaaaag
cttggctataccgttgagccggagacttttttcgatacgatcacagtcgaagtcggtcac
atgcaggctctcatcctgcgtgcagccgtcgctgagggcgtgaacctgcgcaaggtcggc
gaaacgaagatcggcatcagcctggacgagcgcacccgtccggcgacggtcgaagccgtc
tggcgcgcattcggcggcgatttccgcatcgcagatttcgagccgtcctatcgcctgccg
agaaccctgctgcgcaccagcgaatacctctcgcatccgatcttccacatgaaccgcgcc
gaaagcgagatgacgcgttatatccgtcgtctctccgaccgcgacctggcgctcgaccgc
tcgatgatcccgctcggctcctgcaccatgaagctgaacgccacggcggaaatgctgccg
atcacctggccggaattctcggatatccatccgttcgtcccggccgatcaggcgctcggc
tatcgcgaaatgatcgacgacctgacggaaaagctctgcgccgtaacaggctatgacacc
ttctccatgcagccgaattccggcgcgcagggcgaatatgccggccttctgaccatccgc
aactaccacattgccaatggtcagggtcaccgcgacatttgcctcattccgacctccgcc
cacggcaccaaccccgcctcggcacagatggctggcatgaaggtcgtggtcgtcaaggtc
agcgatgacggcgatattgacatggccgatttccgtgccaagaccgagcaatatgccgac
aacctctcctgctgcatgatcacctacccttcgacgcatggcgtgttcgaggagacggtg
aaggagatttgcgatctcgtgcataagcatggcggtcaggtctatctcgacggcgccaac
atgaacgctatggtcggcctgtcgcgtcccggcgatatcggctccgatgtcagccacctg
aacctgcacaagaccttctgcatcccgcatggcggcggcgggcccggcatgggtccgatc
ggcgtcaaggcgcatctggcgcctcacctgcccggccatccggaaacggacggccgcagc
ggtgcggtctcagcagcagccttcggttcggcctcgatcctgccgatcccctggagctat
tgcctgatgatgggcggtgaaggcctgacgcaggcaacgaaggtggcgatcctcaacgcc
aactatatcgctgcccgtctcaagggcgcctatgacgtgctctacaagtccaaggacgga
cgcgtggcgcatgaatgcatcatcgacacccgcccgctggccgcaagcgccggcgtgacg
gtcgacgatgtcgccaagcgcctgatcgattgcggcttccacgcaccgaccatgagctgg
cctgttgccggcacgctgatgatcgagcccacggaatcggaaacgaaggccgaactcgac
cgcttctgcgaggcgatgctggccatccgcgaggaagctcgcgccatcgaagacggccga
atggacaagaccaacaatccgctgaagaacgctccgcacacggtggaagatctggtcggc
gagtgggatcgtccctattcccgcgaacaggcctgcttcccgcccggtgccttccgcgtc
gacaaatactggtctccggtcaatcgcatcgacaacgtctatggcgatcgcaacctgatc
tgcacctgcccgccgctggaatcctacgcggaggccgcggaatag
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