Rhizobium sp. 11515TR: CKA34_13110
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Entry
CKA34_13110 CDS
T06097
Name
(GenBank) RNA helicase
Organism
rhr
Rhizobium sp. 11515TR
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
AAA_22
AAA_19
DUF6993
Motif
Other DBs
NCBI-ProteinID:
ASW06734
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Position
2642001..2643521
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AA seq
506 aa
AA seq
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MTTFADLGLSQKVLSAVTDAGYTTPTPIQAGAIPFALQRRDICGIAQTGTGKTASFVLPM
LTLLEKGRARARMPRTLILEPTRELAAQVAENFEKYGKNHRLNIALLIGGVSFEEQDRKL
ERGADVLICTPGRLLDHFERGKLLMSAVEIFVIDEADRMLDMGFIPDIERIAKLIPFTRQ
TLFFSATMPPEIQKLADRFLQNPERVEVAKPASTAKTVTQRFVASHGKDYEKRATLRDLI
RAQTDLKNAIIFCNRKKDVSDLFRSLDRHGFSAGALHGDMDQRSRMTMLQNFKDGNLQLL
VASDVAARGLDIPDVSHVFNFDVPIHSEDYVHRIGRTGRAGRSGAAFTIVTKRDTKHVDA
IEKLIGEDVQWLNGDLSALPPADESSDDNRSSRRRDQKGKGRDRDRSRGGRNASSHKSDI
DVEDNDVVAIEAAPAKAESVKNERKSENNNNRSHNGSRNNHRPFPAANDDHRERRNRYRD
QDDGPTPVGFGDDIPAFMLIVANAKA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttgctgaccttggcctgagccaaaaagtcctttccgcggtgactgacgcg
ggctacacgacaccgactccgatccaggccggtgcaatcccctttgcgcttcagcgccgc
gacatctgcggcattgcccagaccggaaccggtaagacggcctccttcgtgctgcccatg
ctgacgctgctcgaaaagggccgcgcacgcgcccgcatgccgcggacgctcattctggag
cccacgcgcgaactcgcagcgcaggtcgccgagaacttcgagaagtacggcaagaaccat
cgcctgaacatcgctcttctgatcggtggcgtttccttcgaagagcaggatcgcaagctg
gaacgtggcgccgatgtgctgatctgcacgcccggacgtctgctggaccatttcgaacgc
ggcaagctgctgatgagcgccgtcgagatcttcgtcatcgacgaagccgaccgtatgctc
gacatgggtttcatccccgatatcgagcgcatcgccaagctcatcccctttacgcgtcag
acactgttcttctcggcaacgatgccgccggaaatccagaagctggccgatcgcttcctg
caaaacccggaacgcgttgaagtcgccaagccggcatcgactgccaagaccgtgacgcag
cgcttcgtcgcttcgcatggcaaggattatgagaagcgcgccacgctgcgcgatctcatc
cgtgcccagacggatttgaagaacgcgatcatcttctgcaatcgcaagaaggatgtttcc
gatcttttccgttcgctggaccgccacggcttttccgccggtgcactgcatggtgacatg
gaccagcgctcgcgcatgaccatgctgcagaacttcaaggatggaaatctgcagttgctc
gttgcctccgacgtcgcagcacgcggcctcgatatccccgatgtgagccacgtcttcaat
ttcgatgttccgatccattcggaagactatgttcaccgaatcggccgcaccggtcgcgcc
ggccgttccggcgccgccttcaccatcgtcacgaagcgcgacacgaagcatgtcgatgcc
attgagaagctgatcggggaagacgtccagtggctgaacggcgacctttcggctctgccg
cccgcagacgagagcagcgacgacaatcgttcgtcccgccgccgcgaccagaagggcaag
ggccgcgatcgggatcgcagccgcggaggccgcaacgcctcgagtcacaaatctgatatc
gacgtcgaggataatgacgtcgtagcgatcgaagcagcaccagcaaaggccgaaagcgtg
aagaacgagcgcaagtctgagaacaacaataacagatcccataacggttctcgcaacaac
caccggcccttccctgctgccaatgacgatcaccgcgaacgccgcaaccgctatcgcgat
caggacgacggcccgacgccggtcggcttcggcgacgatatcccggctttcatgctcatc
gtggcaaacgccaaggcctga
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