Rhizobium sp. 11515TR: CKA34_13450
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Entry
CKA34_13450 CDS
T06097
Name
(GenBank) glycoside hydrolase 43 family protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00520
Amino sugar and nucleotide sugar metabolism
rhr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CKA34_13450
Enzymes [BR:
rhr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
CKA34_13450
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
ASW06793
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Position
complement(2712843..2714453)
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AA seq
536 aa
AA seq
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MIRNPILPGFNPDPSICRVGEDYYIATSTFEWYPGVQIHHSRDLVNWTLVRRPLERASQL
DMRGEPDSCGIWAPCLSYADGLFWLVYTDVKRYDGNFKDAHNYIVTSPTIEGEWSEPVYV
NSSGFDPSLFHDDDGRKWFVNMQWNHRTESYGGSPKTPAFDGILLQEWDPASKSLKGPIR
NIFAGTELGLVEGPHLFKRNGWYYLTTAEGGTGYDHAVTTARSRDIAGPYELHPNKYLIT
SKDHPEAALQRAGHGQYVETHDGQFYHTHLCGRPLPPHRRCTLGRETALQKCVWKGDGWL
YLENGTSIPDVEVAGLNGAQRIEKPRRSGYNFDERELPRDFQWLRTPQPERIFSVTERPG
HLRLIARESIGSWFEQALVARRQEHHSFRAETVVDFEPDTYQQVAGLTHYYNRFKLHAIA
VTLHEKLGRCVTIMTCPGDYPNGRLSFPIEGGVTVPDGRIQLAMEVRDNDLQFYWQAEGM
GAWQAIGPVLDAGVISDEGGRGEHGSFTGAFVGMFAFDTSGRAKTADFDWFNYDEL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaatccgatcctgccgggtttcaaccccgacccgtccatctgccgtgtcggc
gaggactactatatcgccacttcgacattcgagtggtatccgggcgtgcagatccatcat
tcgcgcgatctggtgaactggaccctggttcgacggccgctggagcgtgcatcgcagctc
gacatgcgcggcgaacccgatagttgcggcatctgggcgccttgcctctcctacgcggat
ggtctgttctggctcgtctacaccgacgtcaagcgctatgacggcaactttaaggacgcg
cataattacatcgtgacttcgccgaccattgaaggcgaatggtccgagccggtttatgtg
aactcctccggtttcgatccatccctgttccacgacgacgacggccgcaagtggttcgtc
aacatgcaatggaatcaccgcaccgagagctacggcggctcgccgaaaacgccggccttc
gacggcatcctgctgcaggaatgggatccggcgtccaaatccttgaaagggccgatcagg
aacatctttgccggtacggagctgggactggtcgaagggccgcatctcttcaagcgcaac
ggctggtattatctgaccacggcggaaggcggcactggttacgatcatgccgtgaccacg
gcgcgctcccgcgacattgccgggccgtacgaactgcatccgaacaaatatctgattacg
tcgaaggaccatccggaagcggcattgcagcgcgccggccacggacaatatgtcgagacg
catgacggacagttctatcatacgcatctttgcgggcggcctctgcccccgcatcgccgc
tgtacgctcggtcgggagacggccctgcagaaatgcgtctggaaaggggatggctggctc
tatctcgagaacggcaccagcattcccgatgtcgaggtcgctggtctgaacggtgcccag
cgcatcgaaaagccacgccgcagcggctataatttcgatgagcgcgagttgccaagggat
tttcagtggctgcgcacgccgcagccggaacgcatcttcagcgtaacggaacgtcctggc
catttgcggcttatcgcccgcgagagcatcggttcctggttcgagcaagcgcttgtcgcc
cgccggcaggagcatcacagcttccgggccgaaaccgtcgtcgatttcgagcccgacacc
taccagcaggttgccggccttacccattactacaatcgcttcaaactgcatgccatcgcc
gtgaccttgcatgagaagctcggccgctgcgtcactatcatgacctgcccgggcgactat
ccgaacggccgtctgagttttccgatcgaaggcggggttaccgtgcccgatggaaggatc
cagcttgccatggaggtgcgggacaacgacctgcaattctactggcaggcagagggcatg
ggcgcatggcaggcgatcgggccggtcctcgacgccggcgtcatctcggatgagggcggg
cgcggcgagcacggttccttcaccggtgctttcgtcggcatgtttgccttcgatacctcg
gggcgggcgaagacggcggatttcgactggttcaactatgatgagctataa
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