Rhizobium sp. 11515TR: CKA34_13605
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Entry
CKA34_13605 CDS
T06097
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhr
Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhr01002
]
CKA34_13605
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhr01011
]
CKA34_13605
Peptidases and inhibitors [BR:
rhr01002
]
Cysteine peptidases
Family C82
CKA34_13605
Peptidoglycan biosynthesis and degradation proteins [BR:
rhr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CKA34_13605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ASW06821
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All DBs
Position
complement(2751370..2753268)
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AA seq
632 aa
AA seq
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MKLAIKATASVLALSCCLSSIGATSASAMTLMDFIRGGQGRQQSTQVSAPVPVNPAQTLN
SVEPPRAKQPLPTVDAPKYYTYKADQMRLVSTVHFADPVVTGAVADASPTPVAVDTEVSQ
RRYLADARVTATNDIAKAIESYYADPSKPLLWVADHTVSDKAKAAMAVLADAGSVGLDPA
DYAVTLPGDNAANADPVLRDRALMQFELTLSSKVLMFIQDTVRGRLDPNKISGYHDFKRK
DVNLTAMLDVLRASPDAAAYLNSRSPSNPQFMELKAELAKLRSEAGTDGSHISISLAGTL
KPGDSSPEMANIVKAIEHRGSDALKTAHADLFSAYLGTPSYTPELVSLVEDFQREKGLTA
DGVIGPSSVRAMVGENNDVKIQKLVIAMEQLRWLPDELGPRYVFINQPAFMVYYYNNNQE
QLSMRVVVGSKQHQTFFFENQVQTVEFNPFWGVPQSIIINEMLPKLRSDPNYLDRMGYQV
EVGGRAVASSSVDWYGSTKSISVRQPPSSDNALGELKILFPNSHAIYMHDTPQKSFFKKD
MRALSHGCVRLADPRAMAAAVLNTTVDDVAKQIATGQNKAVAVPQKFPIYIAYFTAWPNK
DGVIQYFNDVYDRDAATQKALDATSKARTAQI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgccatcaaagccacagcatccgtcctggctctttcctgctgcctttcctca
attggcgcaacctccgcaagtgctatgaccctcatggatttcatccgtggcggtcagggc
cgtcagcagagcacgcaggtttcggctccggttcccgtcaacccggcgcagacgctgaac
tccgttgagcctccgcgggcaaagcagccgctgccgaccgtcgatgcaccgaaatactat
acttacaaggccgaccagatgcgtctggtgtcgacggtgcatttcgccgatccggttgtg
accggcgccgttgccgatgcctccccgacgccggtcgcggtcgacaccgaagtctcgcag
cgccgctatctggcggatgcgcgggtcacggcgaccaacgatatcgccaaggcgattgag
tcctattacgccgatccgagcaagccgcttctctgggttgctgaccataccgtcagcgac
aaggcgaaggccgcgatggcggtccttgccgatgccggttccgtcggcctcgatcctgcc
gactatgccgtaacactgcccggcgacaatgccgcgaatgccgatccggtgctgcgtgac
cgggctctcatgcagttcgagctcacgctctccagcaaggtgctgatgttcatccaggat
acggttcgcggtcgcctcgacccgaacaagatctccggctatcacgacttcaagcgcaag
gacgtcaatctgacggctatgctcgatgtattgcgcgccagccccgatgctgccgcctat
ctcaacagccgcagcccgtccaacccgcaattcatggaattgaaggcggagcttgcgaag
ctgcgttccgaggccggaacggacggcagtcacatttccatttcgctcgccggtacgctg
aagccgggtgatagctcgccggaaatggccaatatcgtcaaggcgatcgagcatcgcggc
tcggatgcactgaagacggctcacgccgatcttttctccgcttatctgggcacgccgagc
tatacgcccgagctcgtgtcactggtcgaggacttccagcgcgaaaagggtctgactgcc
gacggcgtgatcggcccgtcctccgttcgcgccatggtcggcgagaacaacgatgtgaag
atccagaagctggtcattgccatggagcagctgcgctggctgccggacgagcttgggccg
cgctacgtcttcatcaatcagccggccttcatggtctattactacaataacaatcaggag
cagctgtcgatgcgcgtcgtcgtcggcagcaagcagcatcagaccttcttctttgaaaat
caggtgcagacggtcgaattcaatccgttctggggcgttccgcagtcgatcatcatcaac
gagatgctgccgaagctgcgttccgatccgaactatctcgatcggatgggctatcaggtc
gaagtcggcggccgcgccgtcgcatcgtccagcgtcgattggtacggctcgacgaagagc
atttcggttcgccagccgccgagcagcgataatgcgcttggtgaattaaagatcctcttc
ccgaactcgcatgcgatctacatgcacgacacgccgcagaagagcttcttcaagaaggac
atgcgcgcgctcagtcacggctgcgtccgtcttgccgatccgcgcgcgatggccgccgcc
gtgttgaacaccacggtcgacgatgtcgccaagcagatcgccaccggccagaacaaggct
gtagctgtgccgcagaagttcccgatctacatcgcctatttcaccgcatggccgaacaag
gacggcgtgatccagtatttcaacgatgtctatgatcgcgatgctgccacgcagaaggcg
ctggatgcgacctcaaaggcgcggactgcccagatttaa
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