Rhizobium sp. 11515TR: CKA34_16065
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Entry
CKA34_16065 CDS
T06097
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00230
Purine metabolism
rhr01100
Metabolic pathways
rhr01120
Microbial metabolism in diverse environments
rhr01232
Nucleotide metabolism
Module
rhr_M00958
Adenine ribonucleotide degradation, AMP => Urate
rhr_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CKA34_16065 (xdhB)
Enzymes [BR:
rhr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
CKA34_16065 (xdhB)
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GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ASW07263
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All DBs
Position
3265042..3267378
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AA seq
778 aa
AA seq
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MDKSTFEERKVINGSMHGSLRHDSAHKHVTGAADYIDDIPEPAGLLHGALGLSDRAHAEI
AGIDLSAVKAYPGVLWVFTGADIPGVNDTSSNGMHDEPLLAETKVEFHGQPIFAVIAETR
DAGRRAARLAKIDYRDLPHWSDIDGALANGAPLVYEPMTLKRGEPATEMANAKHRIKAQM
RIGGQEHFYLESHIAMAIPGEDDEVAVWSSTQHPSEIQHIVGHVLGIPSNAVTVNVRRMG
GGFGGKETQGNQFAALAAVAAKKLGRAVKFRPDRDEDMSATGKRHDFLVDYEVGFDDEGR
IHAVDATYAARCGFSSDLSGPVTDRALFHADSSYFYPHVHLVSKPLKTHTVSNTAFRGFG
GPQGMVGGERMIEEIAYALGKDPLEIRRANFYGQPGSGRTLTPYHQEVTDNIINRVVDEL
EQSSDYQARRKAIIEFNRCSRFIRKGIALTPVKFGISFTMTAFNQAGALVHIYQDGSIHL
NHGGTEMGQGLYTKVAQVLADSFQVDIDRVKITATTTGKVPNTSATAASSGSDLNGMAAF
DAARQIKERLVAFAAEKWGVGAEEVQFLPNRVRVGEVEIPFPDFIKQAYFARVQLSAAGF
YKTPKIHWDRKAGRGTPFYYFSYGAACSEVSIDTLTGEYLIDRTDILHDVGRSLNPAIDI
GQVEGAFVQGMGWLTTEELWWDAKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENTEA
TIGRSKAVGEPPFMLSISVLEALSMAVASVADYRVCPRLDAPATPERVLMAVERLKGM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggataaatccaccttcgaggagcgtaaggtcatcaacggctcgatgcacggctcgctg
cgtcatgactccgcacataagcacgtcaccggggccgccgattacatcgacgacattccc
gaaccggccggtctgctgcatggcgcgcttggcctttccgaccgtgctcatgctgagatt
gccggcatcgatctctcggccgtaaaagcctatccaggtgtcctctgggtcttcacgggc
gccgatattcccggcgtcaatgacaccagctccaacggcatgcatgacgaaccgctgctt
gcggagaccaaggtcgaattccacggccaaccgatcttcgccgtcatcgccgagacccgc
gatgctggccgccgcgcagcccgcctcgccaagatcgactatcgcgacttgccgcattgg
agcgatatcgacggtgcgctcgccaatggcgcaccgctcgtctacgagccgatgacgctg
aagcgcggcgaacccgcaaccgagatggccaacgccaagcaccgcatcaaggcgcagatg
cgcatcggtggtcaggagcacttctatctcgaaagccacatcgccatggcaatccccggt
gaggacgacgaagtcgccgtctggtcctcgacgcagcatccgagtgaaatccagcatatc
gtcggccatgttctcgggatcccgtccaacgccgtgaccgtcaacgtacgccgcatgggc
ggcggtttcggtggcaaggaaacgcaaggtaatcagttcgcggcgctcgctgccgtcgcc
gccaagaaactcggccgcgccgtcaaattccgtcccgatcgtgacgaggacatgagcgcg
acaggcaagcgacacgacttcttggtagactatgaagtcgggttcgacgacgaaggccgc
atccatgccgtcgacgccacctatgccgcgcgttgcggcttctcttccgatctttccggc
ccggtcaccgaccgcgcactgttccatgcggattccagctatttctacccacatgtccat
ctagtctcgaagccgctgaagacgcataccgtctccaacaccgccttccgcggctttgga
ggcccgcagggcatggtcggcggcgagcgcatgatcgaggagatcgcctacgcgctcggc
aaggacccgctcgaaatccgtcgtgccaatttctacggccagccgggctccggcaggaca
ttgaccccctatcatcaggaagtcactgataacatcatcaaccgcgtcgtcgacgaactc
gaacagagttccgactatcaggcgcggcgcaaggcgatcatcgagttcaaccgctgcagc
cgcttcatccgcaagggcatcgcgctgacgccggtaaaattcggcatttccttcaccatg
accgccttcaatcaggccggcgctctggtgcatatctatcaggatggctccatccatctg
aaccacggcggcaccgagatgggccagggcctctatacaaaggttgcgcaggttctggcc
gacagtttccaggtcgatatcgatcgcgtgaagatcacggctacgacaacaggcaaggtg
ccgaatacctcggcaaccgctgcctcctccggctcggacctgaacggcatggccgccttc
gatgccgctcgccaaatcaaggaaaggctcgtcgccttcgcagccgagaaatggggagtg
ggagcagaagaagtgcagtttcttcccaaccgcgtacgcgtcggtgaggtggaaattccc
ttcccggatttcatcaagcaggcctatttcgcccgcgtgcagctttccgccgccggtttc
tacaagacgccgaagatccactgggatcgcaaggccggccgcggcacgcccttctattat
ttctcctatggtgccgcctgctcggaagtgtcgatcgatacgctgaccggcgaatatctg
atcgaccgcaccgacatccttcatgacgtcggtcgttccctcaaccccgcgatcgatatc
ggccaggtcgaaggcgctttcgtgcagggcatgggctggttgacgaccgaagagctctgg
tgggatgcgaagggccggctgcgcacgcacgcgccatcgacttacaaaattccgctcgct
tcagaccggccgaagatcttcaacgtccgcctggcggaatggtcggaaaatacggaggcg
accatcggccgctccaaggccgtcggggagccgcccttcatgctcagcatatccgtgctg
gaggctctatcgatggcggtcgccagcgtcgcggattaccgcgtctgcccgcgcctcgat
gcgccggcaacaccggaacgggtgctcatggcagtcgaacggctgaaggggatgtga
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