KEGG   Rhizobium sp. 11515TR: CKA34_16885
Entry
CKA34_16885       CDS       T06097                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
rhr  Rhizobium sp. 11515TR
Brite
KEGG Orthology (KO) [BR:rhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhr03021]
    CKA34_16885 (rpoH)
Transcription machinery [BR:rhr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CKA34_16885 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 Sigma70_r4_2 Sigma70_r3
Other DBs
NCBI-ProteinID: ASW07411
LinkDB
Position
3424561..3425469
AA seq 302 aa
MARNTLPSIAAGEAGLNRYLDEIRKFPMLEPQEEYMLAKRYAEHADRQAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVTEIATKLNVSEEEVVSMNRRL
SGDASLNAPIKASEGDSGQWQDWLVDDHDSQEDVLIEQDELDTRRRMLARAMGVLNDRER
RIFEARRLADEPVTLEDLSSEFDISRERVRQIEVRAFEKVQEAVQKDALERAKALRVVEA
TA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcccgtaataccttaccgtccattgctgccggagaagccggcctcaatcgttatctc
gacgagatccgcaagttccccatgctggaaccgcaggaagagtacatgctcgccaagcgc
tatgcggaacatgccgaccgtcaggctgcccataagctcgttaccagccatctgcgcctc
gtggcgaagatcgccatgggttatcgcggctatggcctgccgatcggcgaagtcgtgtcc
gaaggcaatgtcggcctgatgcaggccgtaaagaagttcgacccggaacgcggtttccgt
ttagcaacatacgccatgtggtggatcaaggcctcgatccaggaatacatcctgcgctcg
tggtcgctcgtgaaaatgggcacgaccgccaaccagaagcgcctgttcttcaacctgcgc
cgtctgaagggccgcatccaggccatcgacgatggcgatctgaagccggaacacgttacc
gagatcgccaccaagctgaacgtttcggaagaagaggtcgtttcgatgaaccgccgactc
tccggcgacgcttcgctgaatgcgccgatcaaggcttccgaaggcgattccggccagtgg
caggattggctcgtcgatgaccacgacagccaggaagacgtgctgatcgaacaggacgag
ctcgacacccgccgccgcatgctggcgcgcgccatgggcgtcctgaacgaccgcgaacgc
cgcattttcgaggcgcgccgtctcgccgacgagccggtgacgctggaggatctgtcgtct
gagttcgacatcagccgcgaacgtgtccgccagatcgaggttcgcgccttcgaaaaggtg
caggaagccgtgcagaaggatgcgctggaacgcgccaaggcattgcgcgtcgtcgaagca
acggcgtaa

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