Rhizobium sp. 11515TR: CKA34_17495
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Entry
CKA34_17495 CDS
T06097
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKA34_17495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_17495
Enzymes [BR:
rhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKA34_17495
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKA34_17495
RecFOR pathway proteins
CKA34_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
AAA_3
AAA_22
Rad17
AAA_2
AAA_16
AAA_17
AAA_18
nSTAND3
RNA_helicase
AAA_33
DUF815
AAA_28
TsaE
AAA_24
NTPase_1
IstB_IS21
ABC_tran
NB-ARC
Sigma54_activ_2
AAA_7
Cytidylate_kin
NACHT
Motif
Other DBs
NCBI-ProteinID:
ASW07517
LinkDB
All DBs
Position
complement(3553532..3554572)
Genome browser
AA seq
346 aa
AA seq
DB search
MSEAARLISPEKRGEDIDATLRPQSLDEFTGQAEARANLKVFIEAAKGRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLS
FYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVAKVEAV
TREIADEALTRLLVDNVGFDQLDKRYLNMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTAIAWKHLGLQPPKDLEAAQFGLFREED
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagccgcacgtcttatatcgccggaaaagcggggcgaagacatcgatgcgacg
ctcaggccgcaatcgctggacgaatttaccggccaggcggaagcgcgcgccaatctgaag
gtcttcatcgaggcggccaagggtcgcggcgaggcgctggatcatgtgttgttcgtcggc
ccacccggcctcggcaagacgacgctggcgcagatcatggcgaaggaactcggcgtcaat
ttccgctcgacgtccggcccggtcatcgccaaggcgggcgatctggcggcgctactgacc
aatctcgaagagcgggacgtgctcttcatcgacgaaatccatcgtctcaacccggctgtc
gaggaaatcctctatccggcgatggaggattttcagctcgatctgatcatcggcgagggc
ccggcggcgcgttcggtgaagatcgatctcgccaagttcacgctggttgcggccacgacc
cgtctcggcctgttgacgacgccgctgcgcgatcgtttcggcattccggtgcgcctgagt
ttctatacggtcgaggaacttgaactgatcgtccggcgtggtgcgaggctgatggggctt
ggcatgaccgatgagggtgcgcgggagatcgcgcgccgcgcccgcggcactccgcgtatt
gccggccgcctgctgcgtcgcgtgcgcgatttcgctgaggtcgcgaaggtcgaggcggta
acgcgcgagattgccgacgaagcgctgacgcggcttctcgttgataacgtcggcttcgac
cagctcgacaagcgctacctcaatatgatcgcggtcaattttggcggcgggcctgtcggc
atcgagaccatcgccgccggcctttctgagccgcgcgacgcgatcgaggatattatcgag
ccctatatgatccagcagggcttcatccagcgcacgccgcgcggccgggtcttgaccgcg
attgcctggaaacatctcggcctgcagccacccaaggatctggaggccgcgcagttcggg
ttgttccgggaggaagattga
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