Rhizobium sp. 11515TR: CKA34_19550
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Entry
CKA34_19550 CDS
T06097
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00630
Glyoxylate and dicarboxylate metabolism
rhr00680
Methane metabolism
rhr01100
Metabolic pathways
rhr01120
Microbial metabolism in diverse environments
rhr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CKA34_19550
09102 Energy metabolism
00680 Methane metabolism
CKA34_19550
Enzymes [BR:
rhr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
CKA34_19550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_10
Fer4_6
Fer4_9
Fer4_2
Fer4_15
Fer4_16
Fer4_4
TPP_enzyme_M
LdpA_Fe-S-bd
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ASW07882
LinkDB
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Position
complement(3983851..3986730)
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AA seq
959 aa
AA seq
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MSLVPEIDYGTPASTSETMVTLTIDGRQITVPEGTSIMRASMEAGIQVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPASCTTPVAPGLVVHTQTGRLKDIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARNNGDINLKWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFGSRVSPGMHESFIDSECVSCGACVQACPTATLTEKS
VISIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRILNPMIREKVTDPWREVTWDEAFAHIATEFKRLQYQYGRDSVGGITSSRCTNEET
FLVQKLVRAGFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEHSDVVIVIGANP
TDGHPVFGSRLKKRLRQGAKLIVIDPRRIDLVRTPHVEASYHLPLKPGTNVAMLTALAHV
IVTEGLFDEKFIRQRCDWSEFEDWAAFVSEPQHSPEETEKYTGVSSELVRGAARLFAKGG
NGAIYYGLGVTEHSQGSTTVMAIANLAMVTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVEGTFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMT
PRNGYADWEVTQKMAQAMGLGWNYTHPSEIMDEIAATTPSFALVSYDYLEKMGSVQWPCN
EKTPLGSPIMHVDGFVRGKGKFIRTEYVPTDERTGPRFPLLLTTGRILSQYNVGAQTRRT
ENVVWHAEDRLEIHPHDAEQRGIREGDWIRLSSRSGDTTLRALITDRVAPGVVYTTFHHP
DTQANVITTDYTDWATNCPEYKVTAVQVSPSNGPSQWQVEYDEQARQSRRIVGKMEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgttccagaaatcgattacggcacgccggcctccacctccgaaaccatggtg
acgctgaccattgatgggcgccagatcacggtgcccgagggcacgtcgatcatgcgcgct
tcgatggaagcaggcattcaggtgccgaaactctgcgccaccgacatggtcgatgccttc
ggctcctgccgcctctgtctcgtcgagatcgaaggccgcaacggcacgccggcctcgtgc
acgacgcctgtcgcacccggcctcgtcgttcacacgcagaccggccggctgaaggatatc
cgccgcggcgtgatggagctctatatttccgaccatccgctcgactgtctgacctgcgcc
gccaatggcgattgcgaattgcaggatatggcgggcgccgtcggcctgcgcgatgtgcgc
tacggctacgagggcgacaaccacgtcaaggcgcgcaacaacggcgacatcaatctgaaa
tggatgccgaaggacgagtccaatccctatttcacctatgatccctcgaagtgcatcgtc
tgctcgcgctgcgtgcgggcctgcgaggaagtgcagggcacgtttgcgctgacgatcgag
ggccgcggcttcggctcgcgcgtctcgcccggcatgcatgagagtttcatcgacagcgag
tgcgtttcctgcggcgcctgcgtgcaggcctgcccgaccgcgacactgaccgaaaaatcg
gtcatttcgatcggccagccggagcattcggtcgtcaccacctgcgcctattgcggcgtc
ggctgttccttcaaggcggaaatgcgcggcgaggagctggtgcgcatggtgccctggaag
gacggccaggccaatcgcggccattcctgcgtcaagggccgcttcgcctatggctattcg
acccacaaggaccgcatcctcaacccgatgatccgcgagaaggtgaccgatccctggcgc
gaagtgacctgggacgaggcctttgcccatatcgccaccgagttcaagcggctgcaatat
cagtatggccgcgattccgtcggcggcatcacctcttcgcgctgcaccaatgaagagact
tttctggtgcagaagctggtgcgcgccggcttcggcaacaataatgtcgatacctgcgcc
cgcgtctgccattctcccacaggttacggcctcggccaggcgttcggaacctcggccggc
acgcagaatttcgacagcgtcgagcattccgatgtcgtcatcgtcatcggcgccaatccg
acggatggtcatccggtcttcggctcgcgcctgaagaagcggctgcgccagggggccaag
ctgatcgtcatcgatccgcgccgcatcgatctggtgcgcacaccgcatgtcgaagccagc
tatcacctgccgctgaagccgggcaccaatgtcgccatgctgaccgcgctcgcccatgtg
atcgtcaccgaaggcctgttcgacgagaaattcatccggcaacgctgcgactggtccgaa
ttcgaggattgggccgccttcgtttccgagccgcagcacagcccggaggaaacggaaaaa
tacaccggcgtttcttccgaactcgtacgcggagccgctcgtctctttgcgaagggcggt
aacggcgcgatctattatggcctcggcgtcaccgagcacagccagggttcgaccacggtc
atggcgattgccaatcttgccatggtgacgggcaatatcggccgtccgggtgtcggcgtg
aacccgctgcgcggacagaacaatgtgcagggctcctgtgacatgggctccttcccgcac
gagctgccgggctatcgccacatctccgacgatgcgacccgcgatatcttcgaaaagctc
tggggcgtgaagctcaacaacgagccgggcctgcgtattccaaacatgctggatgctgct
gtcgaaggcacgttcaagggcatctacattcagggtgaggacattctccagtccgacccg
gataccaaacatgtcgcagccggccttgccgcgatggaatgcgtcgtcgtccacgatctc
ttcctgaacgagacggccaactatgctcacgtcttcctgcccggctcgaccttccttgaa
aaggacggtaccttcaccaatgccgagcgccgcatcaaccgcgtgcgcaaggtcatgacc
ccgcgcaatggctatgccgactgggaagtgacgcagaagatggcacaggccatgggcctt
ggctggaattacacgcatccgtctgaaatcatggacgagatcgccgccacgacgccgagc
ttcgcgctcgtctcctacgactatctggaaaagatgggttcggtgcagtggccctgcaat
gagaagacgccgctcggctcgccgatcatgcatgtcgatggcttcgtgcgcggcaagggc
aagttcatccgcaccgaatatgtcccgactgacgagcgcaccggcccgcgcttcccgctg
ctgctgacgaccgggcgtattctcagccaatacaatgttggggcgcagacgcggcgtacc
gaaaatgtcgtctggcatgcggaggatcgcctggaaatccatccgcacgatgccgagcag
cgcggcatccgtgaaggagactggatccggctcagtagccgctccggcgacacaacgctt
cgtgcgctgattactgaccgcgttgcccccggcgtcgtctacacgaccttccaccatccg
gatacgcaggcgaacgtcatcaccactgattataccgactgggcgacgaactgcccggaa
tataaggtgacggccgtgcaggtctcgccgtcgaacggtccgtcgcaatggcaggtcgag
tatgacgaacaggcccggcagtcgcggcggatcgttgggaagatggaggcagcggagtga
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