Rhizobium sp. 11515TR: CKA34_21420
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Entry
CKA34_21420 CDS
T06097
Name
(GenBank) histidine kinase
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKA34_21420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_21420
DNA repair and recombination proteins [BR:
rhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKA34_21420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
AAA_12
MTES_1575
AAA_11
PK_Tyr_Ser-Thr
DUF4011
AAA_19
UvrD-helicase
SLFN-g3_helicase
AAA_30
AAA_5
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ASW08558
LinkDB
All DBs
Position
p11515TR-A:423613..429885
Genome browser
AA seq
2090 aa
AA seq
DB search
MIRLCPNCNTERPLSEFFCQNVLTGGKTCNWDLTSVAIREPGASSAQSADSLLDVSAPAA
SLPHERTCPNGHPVEEGDLLCVTCGAEIEMDGPALATVVAEPASNTSPVSASVPTEIGGW
TVESRIASSSSVRERFIATNPVSGQRGVLTLYADGAEPDTAVYDAIRNMPLDHLPEIFEI
GRWNGRAYEISEEITGGTLEQLIANSSDTDLLRTITFEIGKALGSFSQAGLRHRDIRPSN
VLIRTAAPLDLVISGFGSARLSDYDLDIVAPLETTRYMAPEAIAGGVSAASDWWSLGMIV
LEIATAGKCFEGINSHALLIHIITNGVEIPTDIHPTIAVLLRGLLTRDHRDRWQWREVRA
WYDGEDVPVSNTGQSTPEQDSRAAISLGGKEFRKPSSYALAAAEPGNWDEARNQVTRGSV
AAWVEDAGIDPAAQAAIRRLSHTEGLMDDLKLSLALKILHPSMPLIVKGNIVTPGWLLDH
PVEGTELIFGPATEFLRRLGAEEWLQRMKQRGLSVREKAKQFSIQLNEEDLQIHLLSTSK
ARLTALWAERRRIFPDTDHPGLNSLIERRQTTEEDFILLLSAEVSQFRSVDEILDETSKT
ADRAGVHFFDREEARELLQHSRRDLHAMIEDRLNGFSRCGVERVDEWADQFRLDRRISLD
RSLVLLSVPAEHWLEPPKQAYVSTLLEYFSKKISGSILRGPLTKMTIGKTTPRVDVTELG
TESRPAPAILDHILARSEQTQTLDPAAIGVSDTLERRMRSLHAHSTLYKRDTGIDGMYLG
FPFLLHREDRTRTRIAPILLWPIKIIPEVGNRGHASIGFDRDRDEVRLNPAFEGMFGIDA
ARRWQEAANDLLGRSTVTAADVVDGFGGLADLGVRQLGQLPGKDTTVEIGRPKIVCAGVF
FHLAYMGQAIVEDLRALKGKQLSDSGLETALKVTDAEPAAPTATKVPELDRYFTVASDPS
QEAAVLEARNAPGLVIQGPPGTGKSQTIVNMVADAIGRKKSLLVVCQKQAALEVVKKRLE
AEGLEDRIFMITDTNRDREPILTAIRDQLTAQHGAAGTQGWRRDRQNLAMRIETIEKDLN
VHHEALHHVDETTGLSYRELLGELIELEASGVPLDVPGLRRLLVRLEAGAVAALAEACAS
QARFWLPSKFEGNALAALKIFNPDEANMAAFRGDLIAFVDSETERLAVLTKTDHALPMND
PEPYRLWFDRHDADFQQLEDQERHNLARWLRLCGRSGTDSKALEIASVLAELAGRLRSLL
GTSPPENIRIRMAALDGNALQSDVDLARAVSIQPTGLGKLNPFRWLRAKRLKTRTAQLGL
EGTPPTDLLRAGEWELQLRPLREALIATLVGLGDGKLVNREMPWDALARLADDRHAALKK
TQALANAAFAFPSADAMGQVVAKATLAQYEQLRDSAEHAFERHEAKQFSRASLSNAEQWL
EPGWVEARLQAINNDEGNDTAIDAIFRALTTLEPFQRFRIRLNALPAEAMEIFAVLRTKE
NDLLAVPVHKLEDEVRKIINREARLAWKTKLESEFPQLLYDASELQSKIRTVAESERAMR
RANKQMLTYGIDGSKVASEREWEPITRLRGQRAQRLREFLEKGPDLGLMELRPVWLMNPD
VASRVLPLRKGMFDIVIYDEASQMPVEYALPTLFRGKIAIVSGDEKQMPPTAFFSSKVEN
DEADVFDGEDLDEDATEVERETYNDTWNRREIKDCPDLLQLAKSVMPTTTLQIHYRSAYR
ELIGFSNASFYANRLSVPVRHPDDEIRRAKPIEVVRADGVYLDQKNEIEAEKVVDVLADL
WKADGRKPTVGIVTFNRKQADLIDEVLEARARRDEQFRTILTRERDRVEGGEDVGFFVKN
VENVQGDERDVIIFSSTFGRNAQGSFRRNFGVLGQKGGERRLNVAVTRARSKVIMVTSMP
TELVSDMLSSRRKPTIPRDYLQGYLEYARMMSDGDFTSGRTLLDRLVTERSAMQYRGEDS
LDGFANSVFEFLSRLGVEPHRVNDGSAFGLDFAIENPRTGLYGLGIECDAPRHKILDNAR
AREIWRPSVLKRSIPNIHRVSSHGWYHSPDEERQHLRSAVEAALYKEAAE
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgattagactctgtcctaactgcaacaccgaacgtccgctgagcgaattcttctgccaa
aatgtgctgactggcggaaaaacctgcaactgggatctgacgtcggtcgcgatccgtgag
ccgggtgcgagttccgcccagtctgcagacagcttgctagacgtttcagctcccgccgcc
tcactcccacatgagcggacctgccccaacggtcatcccgtcgaagagggtgatcttctt
tgcgtgacctgcggtgcggagatcgaaatggacggccccgctctcgccaccgttgtcgcg
gagcctgcttctaacaccagtcccgtatcggcgtcggttccgaccgaaattggcggttgg
accgttgagtcccggatcgcctcatcgagttcggtccgtgaacggtttatcgcgacgaat
ccggttagcggacaaaggggcgtcctgacgctttatgctgatggggcggagcctgacacc
gcagtctacgatgcgatccggaatatgcctcttgatcatctgccggaaattttcgaaatc
ggccgctggaacggccgcgcgtacgaaatcagtgaggagatcaccggcgggactctcgaa
caacttatagcgaactccagcgacactgacctcctacgcactatcaccttcgagattggg
aaagcgctaggctcgttctctcaggcgggcctgcgccaccgtgacattcgtccatcgaac
gtcctgatccgaacagcggcccctctggatcttgtgatcagcggtttcggctcagcccgg
ctttccgactacgatctggacatcgtcgctccactggaaaccacacgctatatggctccg
gaagccattgcgggcggtgtttcggcggcttccgactggtggagcctgggcatgatcgtc
ctcgagatcgctaccgccggaaaatgcttcgaaggcatcaattcacatgcactgttgatc
catatcattaccaatggcgtcgaaatcccgaccgacatacatccaacaatcgcagttttg
ctgaggggattgctaacacgcgatcaccgagaccgctggcagtggcgcgaggtcagagcc
tggtacgacggcgaagacgtcccggtatcaaacactggacaatcgacaccagagcaagac
agccgcgcagcgatttcactcggcggcaaggagttccgcaaaccgtctagctacgccttg
gcggccgctgaacccgggaactgggacgaggcccgaaaccaggtgacccgcgggagcgtt
gcggcatgggtcgaagacgcagggatcgatccggctgcgcaagccgccatccgccgcctt
tcccacacagaaggcctgatggatgacctgaagctttcgcttgcgctaaagattctgcat
ccctccatgccgctcattgtcaaggggaacatcgtcacgcccggttggttgctcgaccat
ccggtagaaggcacggagctgatcttcggtcccgccaccgaattcctgcgccgactgggt
gcagaagagtggcttcagaggatgaagcagcgcgggctttcggttcgggagaaggcaaag
cagttttcaattcagttaaacgaagaagacctgcagatccatctgctgtcgacctccaaa
gcccgattgacggccctctgggctgagcgcagacgcatctttccagacacggatcatcct
ggcctcaactccctgatcgaacgacgccaaacaacagaagaggatttcattctcctcctg
tcggcggaagttagccaattccgatcagttgacgaaatcctcgatgaaacttccaaaact
gctgatcgagccggagtgcatttcttcgaccgcgaagaggccagagaactgttgcagcac
tcccgacgcgatcttcatgcaatgatcgaagatcgcctcaacggtttctcgcgctgcggc
gttgagcgagttgacgaatgggccgaccaattccgcctagatcgcaggataagtctcgac
cgatcgctggtcctgctttcggttcccgccgaacactggctggagccgccgaagcaggca
tacgtatcgacgttgctcgaatacttctcgaaaaagatctcgggcagcatcctacgcggc
cctctaactaagatgacgatcggcaaaacgacgccacgtgtagacgtcacggaattggga
acagagagccgtccagcccctgccattctcgaccatatccttgctcgatccgagcagaca
cagacgctcgatcccgccgcgataggtgtatcggatacgcttgagcgccggatgcggagc
ctccatgctcactcgactttgtacaagcgagataccgggatcgacgggatgtatcttggt
tttccctttttgctacatcgggaagaccggactcgcacccgaattgcgccgatcctctta
tggccaatcaagattatccccgaggttggaaaccgtggacacgcgtcgatcgggtttgat
cgagatcgtgatgaggtccgcctcaatccagcattcgaaggcatgttcggtattgacgcg
gcaagacggtggcaggaagcagcgaacgatttgctcggtcgttcaaccgtgactgccgcc
gatgtggttgacggcttcggcggcttagccgatctcggagttcgccaactcggacagttg
ccgggaaaagatacaacggtggagattggtcggcctaagatcgtctgtgccggagttttc
ttccacctcgcctacatggggcaagccattgtcgaagacctgcgagctctaaaaggtaag
caactgagcgatagcggacttgaaacagctctcaaggttacagatgccgaaccggcagcg
ccgacagctacgaaggttccagagctcgatcggtactttaccgtcgccagcgatccgtcc
caggaagccgcggtgttagaggcgagaaacgcgcccggacttgtcatccaagggccacct
ggtacgggaaagagccagactatcgtgaatatggtagccgacgcgatcgggcgaaagaag
agccttctcgtcgtctgccaaaagcaggctgccctagaggtcgtgaaaaaacgcctggaa
gccgagggtctcgaagatcgcatcttcatgatcacggataccaaccgcgaccgtgagccg
attttaacggccatccgtgaccagctgacggcgcagcacggtgcggccggaacacaaggc
tggcggagggaccgccagaacctagccatgcggatcgagacgatcgaaaaagacctcaat
gtccatcatgaggcactccatcacgtcgatgaaaccaccgggttatcgtaccgcgagcta
ctcggtgaattgatcgagctggaagcttcaggggtcccgttggatgtccccggcttgcga
cggcttcttgtacgattggaggcgggagcggtcgccgctctggccgaagcgtgcgcatct
caggcgcgtttctggttgccgtcgaaatttgaaggtaacgcattggcggcgctaaagatc
ttcaatccagacgaagccaacatggctgcattcagaggagatttaatagcttttgttgac
tctgaaaccgagcgtctcgcagtcctgaccaagaccgatcatgcgctcccaatgaacgat
cccgaaccatatcgtctttggttcgatcgacacgacgccgacttccagcaattggaagac
caggagagacacaacttggctcgatggctccgcctctgtggacggtccggcactgacagc
aaggcacttgaaattgccagcgtgcttgccgaactcgcgggtcgtttgcgctcgttgctc
ggcacctcgccccctgagaacattcgcatccggatggcggccctcgatggcaacgccctt
caatccgatgtcgatttggcgcgagcagtctcgatccaaccgaccgggcttggaaagcta
aacccattccgctggcttcgcgccaaacggctcaaaacccggaccgctcagttaggtctc
gaaggaacgccaccaacggacctgttacgagccggcgaatgggagcttcaattacggccg
ctccgtgaggctctcattgcgacgcttgtgggattgggcgacggaaagctggttaaccgc
gagatgccttgggacgcacttgcgcgactagcggacgatcgccacgctgctctcaaaaaa
acgcaagcgcttgcgaatgcggcatttgcgttcccgtcggctgatgccatgggacaggtc
gtcgcaaaagccacactggcgcaatacgagcagctacgcgacagcgccgaacatgcgttc
gaacgtcacgaagccaagcaattcagccgtgcgtcgttgtcgaatgcggaacaatggctc
gaacccggctgggtcgaggcaagattgcaggcgatcaacaacgacgaaggtaacgacacc
gctatcgacgccatattcagggcgctgacaacgttggagcctttccaacgtttccgcatc
cggctgaatgccctccccgcagaagccatggaaatcttcgcggtgcttcgcacgaaggag
aacgacttgctggccgtccccgttcacaaacttgaggacgaggtcaggaagattatcaat
cgtgaggcccgtctggcgtggaagacgaagcttgaaagtgaattcccgcaactcctctac
gatgcatccgagttgcaatcgaagatccgcacagtcgctgaaagcgaacgcgcgatgcgc
cgagcgaacaaacagatgctcacatacggcatcgacggatcgaaggtcgcctccgagcgt
gaatgggaaccgattacaaggctcaggggccagagggctcagcgcttgcgcgagttcctc
gaaaaaggtcccgatctcggtctgatggaactccggcctgtctggttgatgaacccagac
gttgcaagccgcgttcttccgctccgaaagggcatgttcgacattgtcatctacgatgaa
gcgtcgcagatgcccgtcgaatacgcgttgccaaccctattccgtggcaagattgccatc
gtaagcggcgatgaaaagcagatgcctccgacggccttcttctccagtaaagtcgagaac
gacgaggccgacgtgtttgacggcgaagatctggatgaggacgcaacggaagtcgaacgc
gagacctacaacgacacctggaaccggcgcgaaatcaaagattgcccggatcttttgcag
ctggctaagtcggtcatgccgaccacgacgctgcaaatccactaccgctccgcctaccgc
gagttgatcggtttctctaacgcatccttctatgcgaaccgcctgagcgttcctgttcgc
catcccgacgacgaaatccggcgcgctaaaccgatagaagttgtccgcgcggacggggtt
tatttagatcagaagaacgaaatcgaggccgagaaagtcgtcgacgtgttggccgatctc
tggaaagccgacggccgcaaacccaccgtcggcatcgtaaccttcaacagaaagcaagca
gacctgattgacgaagtcctcgaagctagagcccggcgggatgaacagttcaggaccatc
cttactcgcgagcgcgaccgtgtggagggcggtgaagacgttggctttttcgtcaagaac
gtcgaaaacgttcagggtgatgaacgcgatgtgatcatcttctcctcaactttcggtcgc
aacgcccagggtagcttccgtcgaaacttcggtgtccttgggcaaaagggcggcgagcga
cgtttgaacgtcgcggttacccgtgcacgttcgaaggtcatcatggtgacatccatgcct
accgagctggtgtctgacatgctatccagccggcgtaaaccgaccattccccgagactac
ctccaaggatatctcgaatatgcaaggatgatgtccgacggcgatttcacaagcggacgc
acgctcctcgatcgcctggtaacggaacgatccgctatgcaatatcgcggcgaagactct
ctcgacggtttcgctaactcggtgttcgaatttctttccagattgggtgtggagccccat
cgagtcaatgacggcagtgcatttgggcttgactttgctattgagaatccgcgaacgggt
ctttacggacttgggatcgaatgcgatgcaccgcggcacaagatactcgataacgcccgt
gcacgcgaaatctggcggccaagtgttctgaagagatcgatcccgaacatccaccgcgtt
tcctcgcacggatggtaccatagcccagatgaggaacggcagcatctccgcagtgctgtc
gaagccgcactctacaaggaggctgctgaatga
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