Rhizobium sp. 11515TR: CKA34_22175
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Entry
CKA34_22175 CDS
T06097
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr00730
Thiamine metabolism
rhr01100
Metabolic pathways
rhr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CKA34_22175
Enzymes [BR:
rhr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CKA34_22175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASW09565
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All DBs
Position
p11515TR-A:596727..598553
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AA seq
608 aa
AA seq
DB search
MNIAAKNLTPTVTTGPLPASRKIHVTGDIHADIRVPMREISVHPTSGEPPVIVYDSSGPY
TVEGADIRIEEGLPQLRRDWVLARGDVEAYEGRHVRPEDNGFVTGERLTPEFPAKRQPLR
AKDGKAVTQLAYARAGIITPEMEFIAIRENLGRKAKAEALVRDGESFGAHIPDHVTPEFV
RREVAAGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAARWG
ADTVMDLSTGRNIHNIREWIIRNSPLPIGTVPLYQALEKVGGIAEELTWEIYRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAKDCQVMIEGPGHVPMHKI
KENMDKQLAVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKTGVITYKIAAHAADLAKGHPAAQVRDDALSRARFEFRWEDQFNLSLDPDTAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAAKYREGGDLYMPV
EAPAQTAE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgccgcaaagaacctcactccgaccgtcaccaccggcccgctgccggcctct
cgaaaaatccatgtcaccggggatatccatgccgatatccgcgtgccgatgcgcgaaatc
agcgtccatccgacatcgggcgagccgccagttatcgtctacgattcgtccggtccctat
accgtcgaaggcgcggatatacgcatcgaagagggcctgccgcagttgcgccgcgactgg
gtgctcgcccgcggcgatgtcgaggcctatgagggccgccatgtgcgtcccgaagacaac
ggcttcgtcacaggtgaacggctgacaccggaatttccggccaagcgccagccgctgcgc
gccaaggatggcaaggcagtcacccaactcgcctatgcgcgcgccggcatcatcacgccg
gaaatggaattcatcgccatccgcgagaacctcggccgcaaggccaaggccgaagcgctg
gtccgtgacggcgagagcttcggcgcgcatattcccgatcacgtcacgcctgaattcgtc
cgccgggaagtcgcagccggccgcgcgatcattccggccaacatcaaccatccggagagc
gagccgatgatcatcggccggaatttcctggtgaagatcaacgccaatatcggcaactcg
gcggtcacctcctcgatggcggaggaggtcgaaaagatggtctgggccgcacgctggggt
gccgataccgtcatggatctttcgaccggccgcaacatccacaacattcgcgaatggatc
atccgcaattcgccactgccgatcggcaccgtgcccctctatcaggcgctggaaaaggtc
ggcggcattgccgaggaactgacctgggaaatctatcgcgatacgctgatcgagcaagcc
gaacagggcgtcgactacttcaccatccatgccggtgtgcggctgcactacatcccgctc
accgtcaaccgcgtcaccggcattgtctcgcgcggcggctcgatcatggccaagtggtgt
ctgcatcaccacagggagagcttcctctacgagcatttcgaggaaatctgcgacatatgc
cgcgcctatgacgtctccttctcgctcggagacggcctgcgaccaggctcgattgccgat
gccaacgacgccgcgcaatttgccgaactcgagacgcttggcgagttgacgaagatcgcc
tgggctaaagactgccaggtgatgatcgaaggccccggccatgttccgatgcacaagatc
aaggagaacatggacaagcagctcgccgtctgcggcgaggcgcccttctacacgcttggg
ccgctgacgacggatatcgccccgggctacgatcacatcacttccgggatcggcgctgcc
atgatcggctggttcggcacggcgatgctgtgttacgtcactccgaaggagcatctgggt
ctgcccgatcgcaacgacgtcaagaccggcgtcatcacctacaagatcgcagcgcatgcg
gcggatctcgccaaaggtcatccggccgcgcaggttcgtgacgatgctctgtcgcgcgcc
cggttcgaattccgctgggaggatcagttcaacctgtcgctcgacccggacacggctcgc
agcttccacgacgaaaccctgccgaaggaagctcacaaggtcgcgcatttctgctcgatg
tgcgggcctaaattctgctcgatgcggatttcgcacgacatccgcgccgaggcacagaag
gaagggctggaagcgatggcggcgaaatatcgggagggcggcgatctctatatgccggtc
gaagcccctgcccagacggccgagtga
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