Rhizobium sp. 11515TR: CKA34_22880
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Entry
CKA34_22880 CDS
T06097
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKA34_22880 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhr02000
]
CKA34_22880 (rhaS)
Transporters [BR:
rhr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
CKA34_22880 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ASW08828
LinkDB
All DBs
Position
p11515TR-A:746744..747739
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AA seq
331 aa
AA seq
DB search
MNIAKKLAIGVALAATLFAGAASAKDIKIGLVVKSLGNGFFEAANKGAQEAAKDLGGVQV
IYTGPTSTTAEGQIEVINSLIAQGVDAIAISANDPDAVVPALKKATQRGIKVISWDSGVA
KAGRILQLNPSSNELIGKMCLTLAKDHLDGGKGNFAILSATTTSTNQNIWIGEMKKQLKD
FPGLNLVTTVYGDDLSDKSYREAQGLLTSHPEVKVIVAPTTVGVLAASQAVKDAGKIGQV
YVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSATQIAYRLVKGETDGKPGSEINAGRM
GKIKVGENGEAAMADPFVYNASNIDQFSKVF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcaaagaaactggcgatcggcgtcgcgctcgccgccacgcttttcgccggc
gcggccagtgcaaaggacatcaagatcggtctcgtggtgaagtcgttgggcaacggcttc
ttcgaagccgccaacaagggcgcacaggaagccgcaaaggatctcggcggcgtgcaggtg
atctacaccggaccgacctcgaccacggccgaaggccagatcgaagtcatcaactcgttg
atcgcgcagggcgtcgatgccatcgcgatttcggcaaatgaccccgatgcagtcgtcccg
gctctcaagaaggccacccagcgcggcatcaaggtgatctcctgggattccggtgtcgcc
aaggccggccgcatcctgcagctgaacccctcgtccaacgagctgatcggcaagatgtgc
ctgacgctcgccaaggatcacctcgacggcggcaagggcaacttcgccatcctgtcggcc
acgacgacgtcgacgaaccaaaacatctggatcggcgagatgaagaagcagctgaaggat
ttcccgggcctcaacctggtgacaacggtctatggcgacgacctctcggacaagagctat
cgtgaagcccaaggccttttgacctcgcatccggaagtcaaggtcatcgtcgctccgacg
acggtcggcgtgctcgccgcttcgcaggccgtcaaggatgccggcaagatcggccaggtc
tacgtgaccggtctcggcctgccgtccgaaatggccggcgccatcaagtccggtgcaacg
aaggaatttgcgatctggaacccgatcgatctcggctattccgcaacgcagatcgcctat
cgcctcgtcaagggcgagaccgacggcaaacccggcagcgagatcaatgccggccgcatg
ggcaagatcaaggttggcgaaaacggcgaagccgccatggccgatccgttcgtctacaac
gcttcgaacatcgatcagttctccaaggttttctga
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