KEGG   Rhizobium sp. 11515TR: CKA34_27795
Entry
CKA34_27795       CDS       T06097                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
rhr  Rhizobium sp. 11515TR
Pathway
rhr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKA34_27795
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhr02044]
    CKA34_27795
Secretion system [BR:rhr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKA34_27795
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Colicin_V
Other DBs
NCBI-ProteinID: ASW09830
LinkDB
Position
p11515TR-B:complement(209902..213384)
AA seq 1160 aa
MNPLGAFYTLRSYVSAYAGLLGQRFISLIWVVAICVVIWFYGSMAGYGSFKPLSSTTTRM
IAIGVIIAGWLIYMLVTTLRARKRDKALVEGIADDAASQQAEVGEIHSRLKEALLLLRRI
SKKRFGYIYELPWYVIFGAPGSGKTTALTNSGLKFPLGDAMGSNSVQGAGGTRNCNWWFA
DEAILIDTAGRYTTQDDLNGASKAGWEGFLGLLRKYRRSQPINGALVTLSIGDLLSRDHE
AQLEEVRSIRKRLSELDEFLHARVPVYVVLTKADLLTGFVEFFDGLAKTDREQVWGTTFD
LDESYKGENLPERFMEEFALLQQRVDAMLIERLQQEPNIEVRGRIFRFPAELASLGERLQ
ELLTELCASSNLIESPLVRGVYFASGTQSRETDTPRTRRSYFLSRLFKEVIFGEASLVAR
DRRLSGRQAMIRRIAYGAAAIALAIVFTGWTATYFQNSRAIAAAERRIDNYEKLASGIQV
RDVTDADFLRILPALDNLRSVTNGFDEARVWPTSFGLDQGDKIASRQRGAYQRALNALLL
PRMLVGVQNELKQTSDVQKTFDALKLYGMLGGLGPSDRDFVSQQSEDMFAALYPGEGRSA
TRKALAAHVEAMAAGGLPAIELDNALIAKARETIHSQSLAARAYDILIHSRQARQLDPWL
PTDALGPLGAQIFQRKSKSTLREGIPGIFTGKGYRDVVLPMVATAASEALKEQWVRGDGG
AAPSTMTTDAISQATLQLYFDAFQQQWSSLLADLQVRPSSNLADATETARILAANPSPVE
MALKSIAAATDLRPVAGAEIASVDDVPDAALTAATTGTVSAPDPYGPLRAALEANAANAQ
PASQDGNANASDKPRSQIQGLQPILQNIYGQLSRAANSTAEVARVFDAGGQLANANQDLL
QQARGLPAPADAWMVAVAADIGSLAVKTARARINDLWAAEGADLCARIVTGRYPFDRKSS
QDIAMADFMRLFGPQGLFQSFFKNRLDAFVDTSAQPWGWRGTFGGDSIPSQAIAQFENAS
KIEHAFFPAGSEKPSISINIKPVSLSDNANSVMVDIVGEHVLYNHGQIVPKSIAWPPAGA
VNQSNVRFFPGDLQPAITQTGDWSPFRLFDAAKVTVQAPDLFRARFEDKGQTAEFDVQFG
SVLNPFRLQALSDFSCPAQF
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaatccgcttggcgcattttatacgcttcgctcctatgtctcggcctatgccggtctt
ctcggccagcgcttcatctcgctgatctgggtcgtggcgatctgcgtcgtcatctggttc
tatggttccatggccggctatggcagtttcaagccgctgtcgagcacaaccacccgcatg
atcgcgatcggcgttatcatagcgggttggctgatctatatgctggtcacgaccctacgc
gcgcgcaaaagggacaaggcgctcgtagaaggtattgccgacgatgctgccagccagcag
gcggaagtcggcgaaatccacagtcgcctgaaggaagccctgctgcttctgcgccgtatc
agcaagaagcgtttcggctatatctacgagctgccctggtatgtcattttcggcgcgccg
ggatcgggaaagacgacggcgctgaccaattcggggctgaagttcccacttggcgatgcc
atgggcagcaattccgtgcagggcgccggcggcacccgcaactgcaattggtggtttgcc
gacgaggcgatcctgatcgacaccgctggccgctataccacgcaggacgatttgaatggt
gcgtccaaggccggatgggaaggctttctcggactgttgcgcaagtaccgccgctcgcag
ccgatcaacggcgcgctcgtcacgctctcgatcggcgatcttctcagccgcgatcatgag
gcacagctcgaagaggtgcgttccatccgcaaacgcctgtcggagctcgacgagttcctg
catgcgcgcgtgcctgtttatgtcgtcctaacgaaggccgatctcttgaccggctttgtc
gagttcttcgacggtcttgccaagaccgaccgcgagcaggtctggggcacgactttcgat
ctcgacgagagctataagggcgagaacctacccgagcgtttcatggaagagttcgcgctg
ttgcagcagcgggtcgatgccatgttgatcgagcgcctgcagcaggagccgaatatcgag
gttcgcggtcgtatcttccgctttcccgcagagcttgcctcattgggagagcgcctgcag
gagctgttgacggagctttgcgcctcttccaaccttatcgaatccccccttgttcgcggt
gtctatttcgcctccggcacgcagagccgcgagacggatactccgcgcacccggcgcagc
tatttcctgtcgcgtctgttcaaggaggtcatcttcggcgaggcgtcgctggtcgcccgc
gacaggcgcctttcgggccggcaagccatgatcagacggatcgcttatggcgcagccgcc
atcgcgctggcaatcgtcttcaccggctggacggcaacatattttcagaactcgcgcgcg
atcgcggcagcagagcggcggatcgacaattatgagaagctcgccagcggcattcaggtg
cgcgatgtcaccgatgcggattttctgcggatcctgccggcgctcgacaatctgcgttcg
gtcaccaacggcttcgatgaggcacgcgtctggccgacgagtttcggcctcgaccagggg
gataagatcgccagccgccagcgcggagcctatcagcgtgccttgaatgcgttgcttctg
cctcgcatgctcgttggagttcaaaatgagctcaagcagacatcggacgttcagaagact
ttcgacgccttgaaactgtacggcatgctgggtggattggggccgtccgacagggatttc
gtctcgcagcaatcggaagacatgtttgcagcactttaccccggtgaagggcgctcggcc
acgcgcaaagcgctggctgcccacgtagaggccatggcagcgggcggcctgcccgcaatc
gagcttgacaatgccctgattgccaaggcacgggaaacgatccactcgcaaagtcttgca
gcccgagcctatgatatcctcatccattcccggcaggctcgccagcttgatccctggctc
cctaccgacgcattgggcccgctcggagcccagattttccaacgcaaatctaaatcaacg
ctgcgggagggcattccgggaattttcacaggcaaaggttatcgtgacgtggtgctgccg
atggttgcgactgcagcctcggaagcgctcaaggaacaatgggtccgcggtgacggcgga
gcggctccttcgacaatgaccacggacgcgatttcccaggcgacgctgcagctttatttc
gacgcattccagcagcaatggtcttcgttgctggccgatcttcaggtgcgcccgtcgagc
aaccttgccgatgcgaccgagacggcgcgcatcctggcggccaatccaagcccggtggag
atggcgttgaaatccatagcagccgccaccgacctgcgccctgtcgcaggtgccgagatt
gcctcggttgacgatgttccggacgcagcgctaacggctgccaccacaggcacggtcagc
gcgcccgatccttacggtccgttgcgggccgcgctcgaggcgaatgccgccaatgcgcaa
ccggcatcccaggacggcaacgccaatgccagtgataagccgcgctcccagatccaaggt
ctccagccgatcctccagaatatctacggccaattgtcgcgcgcagcgaactcgacggca
gaagtggcacgcgtcttcgacgccggcggccaactcgccaatgccaatcaggacttgctg
cagcaggcgcgcgggctgccggcgcccgccgatgcatggatggtggcagttgccgccgat
atcggctcgctggcggtcaagacggcccgcgcccgcatcaacgatctatgggctgcggaa
ggcgccgatctctgcgctcgcatcgttaccggtcgctacccgttcgaccggaaatccagc
caggacatcgccatggcggatttcatgcgattgttcggaccgcaaggcctgttccagtct
ttcttcaagaaccggctggatgcatttgtcgacacgagcgctcagccttggggctggcgt
ggtacgttcggcggcgacagcattccgagccaggcaatcgcgcagttcgaaaatgccagc
aagatcgagcatgccttctttccggccggcagtgagaaaccctcgatatcgatcaatatc
aagcccgtttcgttgtcggacaatgccaattcagtgatggttgatatcgtcggcgagcat
gtcctttataatcatggacaaatagtgccaaaatccattgcctggccacccgctggcgca
gtgaatcagtccaatgtcagatttttcccgggagatctgcaaccggccatcacacagacc
ggcgactggtcgcccttccgcctgttcgatgccgccaaggtgacggtccaggcccccgac
cttttccgggctcgatttgaagacaagggccagacggcggaattcgacgtgcagttcggt
tccgtgctcaaccccttccggctgcaggcattgtccgatttcagctgcccggcgcaattc
tga

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