Rhizobium sp. 11515TR: CKA34_31015
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Entry
CKA34_31015 CDS
T06097
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKA34_31015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhr02000
]
CKA34_31015
Transporters [BR:
rhr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CKA34_31015
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASW10374
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All DBs
Position
p11515TR-B:complement(934681..936306)
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AA seq
541 aa
AA seq
DB search
MGIKAKLKAASLLSVWLLAAPAAFADDQPVKGGTLIYLEQQAHTNLYPPAGGFYPNGGIL
NQITDKLTYQNPKTLQIEPWIAESWAVNDVATEYTFKIRKGVTFSDGTPLDANAVAKNYD
TFGLGNKELKQPVSEVINNYDHSEVVDPYTVKFYFKKSSPGFLQGTSVIGSGLVSLKTLA
LSFDQLGDATKIIGSGPFVVESETLGKQLSLKARTDYNWGPSKLEHQGRAYLDGIKYIIT
GEDSVRIGALLSGQADFIRQLQAYDEKQVSDQSFAIYAAPTRGVNDSVAFRPDNPLVADL
KVRQALLHATNNKEIVDTLFSANYPQAKSVISSAAAGYTDLSSKLTYDPALAEKLLDEAG
WKKGASGVREKDGKPLSLAVYESLPQPQNKAVLQLVAQQWAKLGVKLQVLAGTSGNLVTD
NVDPAKTPLVVAEVGRADPDVIKSQFYPKNRDALLQKGGLNPKATFSDDKLNGILETVAS
ETDRDKRLAAAKAAQEYLLDQAYVIPFFEEPQVFAGAPYVKGVAFEAVGRPSFYSAWLAE
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggcattaaagccaaactcaaagcggcaagtttactgagcgtgtggctattggcggcg
ccggcagcatttgccgatgatcagccggtcaagggcggtacgctgatttatctcgaacag
caggcgcatacgaacctttacccgccggccggcggcttctatccgaacggcgggatactc
aaccagatcaccgacaagctgacctatcaaaatcccaagacgcttcagatcgagccatgg
attgccgaatcctgggcagtcaacgatgtggcgacggaatatacgttcaagatccgcaag
ggcgtgaccttttccgacggtactccgctcgatgccaatgctgtcgccaagaattatgat
acgttcggccttggcaacaaggagctgaagcagccggtttccgaggtcatcaacaactac
gatcacagcgaagtcgtcgatccctatacggtcaagttctacttcaagaagtcgtccccg
ggtttcctgcagggaacgtccgtcatcggatccggcctggtctcgttgaagacgctggcg
ctgtcgttcgaccagctaggagatgcgacgaagatcatcgggtccggcccttttgtcgtc
gaaagtgaaacgcttggcaagcagctctcgctgaaggcgcggacagactacaactggggt
ccgagcaagctggagcatcagggccgggcctatctggatggcatcaagtacatcatcacc
ggcgaggacagcgtgcgcatcggcgcattgctgtccggccaggccgatttcatccgtcag
ctgcaggcctatgacgagaagcaggtgtccgatcagagttttgcgatctatgcggcgccg
acccgcggcgtgaatgacagcgtcgccttccgcccggacaatccgctcgttgccgatctc
aaggttcgtcaggcgctcctgcatgcgaccaacaacaaggaaatcgtcgatacgctgttt
tcggcaaattatccgcaggcgaaatcggtcatttcgtcggctgcggccggctacacggac
ctgtcgtcgaagctgacctacgatccggctcttgctgaaaagctcctggacgaagcgggc
tggaagaagggcgcgagcggcgttcgcgagaaggatggcaagccgctttcgctggccgtc
tacgaatccttgccccagccacagaacaaggccgtcttgcagctggtcgcgcagcaatgg
gccaagctcggcgtcaagctgcaggttcttgccggaacctcgggaaatctggtgaccgac
aatgtcgatccggcaaagacaccgctggtcgtcgctgaagtcggacgcgccgatcccgat
gtcatcaagagccagttctaccccaagaatcgcgatgccctgctccagaagggcggtctc
aatcccaaggcgaccttctcggacgacaagctgaacggcatcctggaaaccgttgcctcc
gagacggatcgcgacaagcgacttgcggcggccaaggcggcgcaggaatatctgctcgat
caggcctatgtcatccccttcttcgaggagccgcaggtcttcgctggcgcgccttacgtg
aagggggttgcattcgaggccgtaggacgtccgtccttctacagcgcctggcttgctgaa
cattga
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