Rhodococcus sp. RCBS9: P0M12_04960
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Entry
P0M12_04960 CDS
T11459
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhrc Rhodococcus sp. RCBS9
Brite
KEGG Orthology (KO) [BR:
rhrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhrc03400
]
P0M12_04960
Enzymes [BR:
rhrc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
P0M12_04960
DNA repair and recombination proteins [BR:
rhrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
P0M12_04960
Prokaryotic type
P0M12_04960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WEX04784
LinkDB
All DBs
Position
complement(1052806..1054152)
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AA seq
448 aa
AA seq
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MSNSVIWFRRDLRVGDLPTLTAAADAGGQTLGLFVLDEKLLGPAGSPRQNQLFANLSALD
NQLDGRLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEKVELIATGSPY
AVAPGRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAGTVRWFDPSEKDGGPRRVSIPA
PSGTVSDVVGEAGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLA
DLSKRLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAW
CEGKTGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARYFMSHLVDGDLA
SNQHGWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAM
RPVDYPDPIVDHAHEREEALRRYGEIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaactctgtgatctggtttcgacgcgatctgagggtcggtgatcttccgactctg
actgcagcggcggatgccggcggacagacgttgggtttgttcgtcctcgacgagaagttg
ctcggaccggcaggctcaccccgccagaatcaactgttcgccaacttgtcggcactcgac
aaccagctcgacggacgattgatggttgttcgaggtgatccggcagacgtggtgccccgc
gtggcggaatccgttggcgccgaagaagttcacatcagtgccgactacgggccctacggc
cgacggcgcgacgcggccgtggccgagaaggtggagttgatcgccaccgggtcaccatat
gccgtggcgcccggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccg
tacttccgtcagtggatggaacatggttggcggggccccgcgtcgaccgatgcggggacg
gtccgttggttcgatccgagcgagaaggacggtggcccgcgccgggtgagtatccccgcg
ccgtccggcaccgtcagcgatgtcgtcggtgaggccggtgcgctcgaacagtggaaagaa
tactgcgagaacgatcttgaccggtacgacgacgaacgaaatcgacccgacctcgacacc
acgagtcggatgtcgatcccgctcaagtacggcacgattcatccgagaaccatgttggca
gatctctccaagcgactcggagacggcgctcaggcgtaccgtcgccagcttgcttggcga
gacttctacgcagacatcctgtttcagcgccccgacagcgcgcggaagaattacgacgac
aagttcgaccgtttacgtcacgacgggggagtcgacgcagacgccgccttcacggcctgg
tgtgaaggcaagaccggcttcccgatcgtggatgccggcatgcggcaactcgccgccgag
aactggatgcacaatcgggtccgaatgatcgtcgcgtcattcctggtgaaggacctgcac
attccgtggtggcgcggcgcacggtacttcatgtcgcatctggtggacggtgacttggcc
tccaatcagcacgggtggcagtggactgccgggtcgggtacggatgcttcgcccttcttc
cgcgtcttcaacccgatcacgcaaggggagaagttcgatcccgacggcacatacgtccgt
cggtgggtccccgaacttcgcgatgttcccgggaaggccgtccactcgttgaaggcgatg
cgcccagtcgactacccggacccgatagtcgatcacgcgcacgagcgtgaggaggccttg
cgccggtacggcgagatcaaaggctga
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