Rhodococcus sp. RDE2: RDE2_02000
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Entry
RDE2_02000 CDS
T11469
Name
(GenBank) arabinosyltransferase A
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
RDE2_02000
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhrd01003
]
RDE2_02000
Glycosyltransferases [BR:
rhrd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RDE2_02000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Tmemb_14
Motif
Other DBs
NCBI-ProteinID:
BDB58406
LinkDB
All DBs
Position
complement(217490..220744)
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AA seq
1084 aa
AA seq
DB search
MGEDLRTRYRTARLVAVVAGLLGMILALATPFLPVRVTEATMSWPQDAAATDVELPLMSQ
VPLQFRATVPCSAVAEMPGDGGMLLATAPTNGQDAALNAMFVRVGAENVDVLDRNVVVAT
APRADVESGACSELQIFSDSERTTAEFVGLSDENGNPRSGELTGDLRPLVVGVFSDLPTA
VPGLDVTVDVDSRFTSSPTLVKSLAMILAVLSTALALGALAKLDGTDGRGHRRFLPARWW
KFTGVDVVVVLTLVGWHFFGANTSDDGYLLTMARVSENSGYMANYFRWFGVPEAPFGWYY
DVLAAFAKISTASPWMRIPALIAGILCWMVISREVVPRLGRAVRHNRIALWTGGLVFLAF
WLPYNNGLRPEPIVALGALLTWCSIERAIATGRLLPAATAVVVGAFTLAAAPTGLMCVAA
LIAGIRPMTRIIVRRHREVGTLPLLAPIGAAGLLVLVVVFSDQTLAAVLEATRVRTIIGP
NEEWWNDFLRYYYLMVQTVDGSLPRRFAFLTMLLCLFTTLFVLLRRRRIPGVAVSPTWRL
LGIVFGTIFFMMFNPTKWTHHFGAYAGIAGSLATVTAVVVSASALRSRRNRTIFLAGVLF
VLAVSFAGINGWWYVSSYGVPWFDKTVSLSGYQSSSLFLVLFGLALVLVAWQYLREGYAP
PPESPETKKGRRIRALAAAPLTVVAAVMVLFEVLSLLKGAVSQYPAYSLARSNIGAVAGQ
TCGLANDVLVEADPNEGRLEPIIDPAYPPANDDPLAGAAPRGFTPDGVPSDLTADYVEVK
PGQGNTDNQSVGPTFETGAGGGTTGGSGEQTVNGSTVRLPFGLDPSVTPVLGSYQEGVQE
PAALTSSWYALPGITDETPLVIISAAGRIWSYDDTGALTYGQSLLVEYGTRQADGSVEAK
GTYLPRDIGPAPSWRNLRVPLADLPDDVDAVRIVANDPNLTGDQWLAFTPPRVPTLERLD
SQLGSDQPLLLDWAVGLQFPCQRPFDHWAGVAEMPNYRVLPDRPLAVSSTDTWQSADNGG
PLGFAEVLARPEQVPTYLENDWGRDWGSVERYVRFYPNAQPAELTTTEVTRSGLWKPAPM
RVYE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaccttcgcactcggtaccggaccgcgcgactcgtcgccgtcgtcgccggg
ttgctcggcatgatcttggcgctggccacaccgttcctcccggtccgcgtgaccgaggcg
acgatgtcgtggccgcaggacgcggcggcgaccgacgtcgaactgccgttgatgtcgcag
gtccccctccagttccgcgccaccgtgccgtgcagcgccgtcgcggagatgccgggtgac
ggcgggatgctgctcgcgacggcccccaccaacgggcaggacgccgcgctcaacgcgatg
ttcgtgcgggtcggcgccgagaacgtcgacgtgctcgaccgcaacgtggtggtcgcgacc
gcgccgcgcgccgacgtcgagtcgggtgcgtgcagcgaactgcagatcttctccgactcc
gaacgcaccaccgccgagttcgtcggcctctccgacgagaacggcaacccgcggtccggt
gagctcaccggcgacctgcggccgctcgtcgtcggcgtgttcagcgacctgccgaccgcg
gttcccggcctcgacgtcaccgtcgatgtcgactcccggttcacgtcgtcgccgacactg
gtcaagtccctcgcgatgatcctggcggtgctgtcgacggcactcgcgctcggcgcgctg
gccaaactcgacggcacggacggtcgcggacaccgccgtttcctgccggcccgctggtgg
aagttcaccggcgtcgacgtcgtcgtggtcctcacgctcgtcggctggcacttcttcggc
gcgaacacctcggacgacggctacctgctgaccatggcccgggtgtcggagaactccggc
tacatggccaactacttccgctggttcggtgtccccgaagcgcccttcggctggtactac
gacgtgctggcggcgttcgcgaagatctccacggccagcccgtggatgcgcatcccggca
ctgatcgccggaatcctgtgctggatggtcatcagccgcgaggtggtgccgcgtctcggc
cgggccgtgcggcacaaccgcatcgcgctgtggaccggcggactggtcttcctcgccttc
tggctcccctacaacaacggtctgcggcccgagccgatcgtcgccctcggtgcgctgctg
acctggtgctcgatcgaacgcgccatcgcgaccggtcgtctgctgcccgccgcgaccgcg
gtggtcgtcggcgcgttcacgctcgccgcggcaccgaccggcctgatgtgtgtggccgcc
ctgatcgccggtatccggccgatgacgcggatcatcgtgcgccgtcaccgcgaggtcggc
accctgccgctgctcgcaccgatcggtgccgccgggttgctcgtgctcgtcgtggtgttc
tcggaccagaccctcgccgcggtcctcgaggcgacccgcgtgcgcaccatcatcggcccc
aacgaggagtggtggaacgacttcctccgctactactacctgatggtgcagaccgtcgac
ggttcactgccgcgccgcttcgcgttcctcacgatgctgctgtgcctgttcacgacgctg
ttcgtgctgctgcgccgccgccggatccccggcgtcgccgtgagcccgacctggcgtctg
ctcggcatcgtcttcggcacgatcttcttcatgatgttcaaccccacgaagtggacccac
cacttcggggcgtacgcaggcatcgccggatcgctcgcgacggtcaccgccgtcgtggtc
tccgcgagcgcattgcggtcgcggcgcaaccgcacgattttcctcgccggagtgctgttc
gtcctggcggtgtcgttcgccggcatcaacggctggtggtacgtctcgagctacggcgtg
ccgtggttcgacaagaccgtctcgctgagcggctaccagtcgagctcgctgttcctggtc
ctgttcggtctcgccctggtgctcgtcgcgtggcagtacctccgcgagggctacgcaccg
ccgccggagtcccccgagacgaagaagggccggcggatccgcgccctcgcggctgcgccg
ctcacggtcgtcgccgcggtgatggtgctgttcgaggtgctgtcgctgctcaagggcgcg
gtgtcgcaatacccggcgtactcgctcgctcgctccaacatcggggcggtcgccgggcag
acctgcggtctcgcgaacgacgtgctcgtcgaggccgaccccaacgagggacgcctcgaa
ccgatcatcgaccccgcctatccgccggcaaacgacgacccgctcgccggtgcggcgccg
cgcggtttcactcccgacggcgtgccgtccgacctgaccgccgactacgtcgaggtcaag
ccgggccagggcaacaccgacaaccagagcgtcggcccgaccttcgagacgggcgcgggc
ggcggcaccacgggtggttccggtgagcagaccgtcaacggcagcaccgtgcgtctgccc
ttcgggctcgacccgtccgtcaccccggtgctcggcagctaccaggagggtgtgcaggaa
cccgccgcgctcacctccagctggtacgcccttcccgggatcaccgacgagacgccgctg
gtgatcatctccgcggccggtcgcatctggtcgtacgacgacaccggtgcactgacctac
ggccagtcgctgctcgtcgagtacggcacccgccaggccgacggcagcgtcgaggcgaag
ggcacctacctgccgcgcgacatcggccccgcgccgtcgtggcggaacctgcgtgtgccg
ctcgccgacctgcccgacgacgtcgacgccgtccgcatcgtcgcgaacgaccccaacctc
accggcgaccagtggctggcgttcacgccgccgcgcgtcccgaccctcgagcggctcgac
tcccagctcggttccgatcagccgctcctgctggactgggccgtgggcctgcagttcccg
tgccagcggccgttcgaccactgggccggcgttgccgagatgccgaactaccgggtcctc
cccgaccgtccgctcgcggtgtcgtcgaccgacacctggcagtcggccgacaacggtggt
ccgctcggcttcgcggaggtcctggcgcgacccgagcaggtgcccacctacctggagaac
gactggggtcgtgattggggttcggtggagcggtacgtgcgcttctacccgaatgcgcag
ccggccgaactgaccaccaccgaggtgacgaggtcgggtctgtggaagcccgcgccgatg
cgcgtctacgagtga
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